| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2965 |
|---|
| Symbol | |
|---|
| ID | 5663355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 3630814 |
|---|
| End bp | 3632607 |
|---|
| Gene Length | 1794 bp |
|---|
| Protein Length | 597 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641237604 |
|---|
| Product | peptidase M1 membrane alanine aminopeptidase |
|---|
| Protein accession | YP_001502817 |
|---|
| Protein GI | 157962783 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTAAAGC AATGGGATAA TAATCATGAT TACCACTCGT TTGCCAATAC CGAACAGGTC
AGAGTTAAAC ACCTGTCGCT ATCACTCGAT GTGGATTTTG ATACTAAGCA ATTAGCAGGG
CAGGTCGAGT TACAGCTAGA TTACATTGAT AAACAGACTA CAGCGCTCTG GTTAGATACT
CGTGATCTAA CCATTGAAGC GATTTACTCT AATTCGCAAC AAGCCCTGCA GTTCAGCTTA
GATCAACAAG ATGACACATT AGGCCAGAGG TTGAATATTG AGCTGACTGC AGACGTCTCG
AGTGTGATTA TCCATTACCG TACATCGCCA CAAGCACAAG GACTACAATG GCTGACACCA
CAGCAAACCA GCGGTAAGAC ACTGCCATTT CTTTTTAGTC AGTCTCAACC TATTAATGCG
CGCAGCTGGA TCCCTGTGCA AGATACCCCA AAAGCCAGAA TTACTTTCGA TGCAGTGATC
ACAGCCCCTA AAGGCATGCG AGCGGTGATG AGTGCCATGA ATGATGCTAA TGCACCTTTA
ACTGGTGAGT TTAGCTTTAC CATGGAAAAG CCAATGCCGA CTCATCTATT AGCAATAGCG
GTAGGAGATT TAGCCTTTGG TGAACTAGGC CCAAGAACGG GGGTGTATGC AGAACCTGAG
GTCGTGGCTG CAGCCGTGGC GGAGTTTGAA GACACGGAGA GCATGGTTGA GGTGGCGGAG
TCATTATTAG GGCCATACCC TTGGGGGCGT TATGACATGA TAGTCTTGCC GCCTAGCTTT
CCATTTGGTG GCATGGAAAA CCCGCGCTTG GCCTTTATGA CTCCAACTCT TATAGCGGGT
GATAAAAGCT TAGTGTCAAC GGTTGCACAC GAGCTAGCAC ATTCCTGGAC TGGGAACCTT
GTGAGTAATG CGACATGGCG TGATCTTTGG TTAAATGAAG GTTTTACCAC TTACTTCACC
AATCGTATTG TTGAAGAAGT TTACGGTAAA GAGTTAGCAG AGCTTGAAGT GGTGCTTGAA
AATGGCCGTT TGCAGGAAGC GATTTCAGCT ACCAGTATTG AGGCGCAAAC ACTGCCTGCC
AATATGCAAG ATCAAGATCC AAATGAAGCC TTTAATCGCT TTACTTATGA TAAAGCGTCG
ATGTTTGTTC ATGACTTGGA AAAGCGTCTC GGTCGTACAG CGTTTGATGC ATTTTTATAT
GAATACGTAC AAGCATTTGC CTTTGAGGCG ATCACCACTG AAATCTTTGT CGATTACGCT
AAGCAAACAT TGCTTAAAGA GCACTGTGAC AAGATCACCG AGGCTGAGTT GCTAGAGTGG
ATTTATGGTG AGGGCATGCC TAGCTGGTTT GTTGAGCCGA AATCAACCAG TTTAGATAAA
GTGACTATGG CACTGCGTGC TTTCGATGAT GGTGCTGCAG CTTCAAGTTT GATGACAACG
GGCTGGCGTG TACATCATTG GCAGTACTTT TTAACTAACT TACCTGAGCA GCTGTCCCAT
GAAGCCTTAG CCGATTTAGA CAGCACCTTT GGTTTCACTC AGACTAACAA TGCTGAGATT
GCCTGTGATT GGTTTAGAGT CGCGATTCGT AACCGCTATG AGGCGGTACT CGAGGCTGTG
AGTGCTTATC TAGTCAAAAT TGGTCGCGGA AAGTTTGTTA AGCCCCTTTA TGCAGAGTTG
ATGAAGGCTG GATTCGAGAC TCAAGTACAG CAAATCTATA CGATTGCTCG TGAGGGCTAT
CATCCCTCCA TTGCTGTGAT GTTGGATCAG CAATTATTAA AAGCTGCGCA ATAA
|
|---|
| Protein sequence | MLKQWDNNHD YHSFANTEQV RVKHLSLSLD VDFDTKQLAG QVELQLDYID KQTTALWLDT
RDLTIEAIYS NSQQALQFSL DQQDDTLGQR LNIELTADVS SVIIHYRTSP QAQGLQWLTP
QQTSGKTLPF LFSQSQPINA RSWIPVQDTP KARITFDAVI TAPKGMRAVM SAMNDANAPL
TGEFSFTMEK PMPTHLLAIA VGDLAFGELG PRTGVYAEPE VVAAAVAEFE DTESMVEVAE
SLLGPYPWGR YDMIVLPPSF PFGGMENPRL AFMTPTLIAG DKSLVSTVAH ELAHSWTGNL
VSNATWRDLW LNEGFTTYFT NRIVEEVYGK ELAELEVVLE NGRLQEAISA TSIEAQTLPA
NMQDQDPNEA FNRFTYDKAS MFVHDLEKRL GRTAFDAFLY EYVQAFAFEA ITTEIFVDYA
KQTLLKEHCD KITEAELLEW IYGEGMPSWF VEPKSTSLDK VTMALRAFDD GAAASSLMTT
GWRVHHWQYF LTNLPEQLSH EALADLDSTF GFTQTNNAEI ACDWFRVAIR NRYEAVLEAV
SAYLVKIGRG KFVKPLYAEL MKAGFETQVQ QIYTIAREGY HPSIAVMLDQ QLLKAAQ
|
|---|
| |