Gene Spea_2957 details

Gene Information

• Locus tag: Spea_2957
• ID: 5663347
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 3619205
• End bp: 3621316
• Gene Length: 2112 bp
• Protein Length: 703 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 641237596
• Product: dystroglycan-type cadherin domain-containing protein
• Protein accession: YP_001502809
• Protein GI: 157962775

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGT TAAGCTTACT TGCCGCCTCT ATCGGCATCA TTTTAGCAGG TTGTAGCAGT 
GATGATGACA ATGCCATTAG CACGTTTGAA GTTAAAGCTA TCGACGGCTA TCTAGTTAAC 
GCCGATATCT ACGCGGGCGA CAAGTGCGAC ACAAAGGCTG GCGTCACCGA TGAGCGCGGC 
ATAGCTAAAA TCGATGAAAA ATTCAAAGAC CAAAAACTGT GTGTTAAAGC TGTTGTAGGA 
CAAACAATTG ATAGCGACCG CGGCATTGTC ACCAAAGCAT TCGAATTATC GGCTCCAGCT 
GACTCTACGG TTATCAACCC GATGACCAAC CTTGTTGTAG AGAAAATGCA GGCAACACCA 
AGTCTAACGG CTGAAGATGC AAAAGCTGAA GTTACCAAGC AATTCGCGGC ACTAAACGCT 
AAGCCAGAGC AGTTATTTGG TGACTACATT GCTGACGCCA ATGCTGGCAA TAAAGTCGCA 
GAAGGTATCA AGGTTATCGG CGAGACCTTA GTCGATGCGC AAGTAGAAGA CACTGATGTT 
TCTGAAGTGA TTTTAGACGA CTTAGTGACT GATGTTGCTG ACAAAGTTGA AAGTAATGAA 
GACCTTGACG ATTACGCACC AGTAATTGAT AAAGAAGAAG GCTTCAAACC AAACCACAGA 
CCAAACATCA CTTTAACTGA CGCAGAGCAA GATAAGCTTG AAGAAATTAA GCTTGAACTT 
GGTCAAACTA TTGCAACTAT CGAGCTATTG TCAGCCTTTG ACGATAAAGA TAATGATCTG 
TTAACTCTTG AAGTTAAGAG CGAAGATGGC GAAACATTGG CTGAACTAGG CCTAGCATTC 
AACAGCGACA CAGGTCTACT TAGCGGTAAA CCATTAACAG CAGGTGAGAT TGAGCTACAT 
GTCTATGCGA CAGACAGCAA AGGTGCTCGC TCATACCCAC TAGAAATCGA AATCGATGTT 
ACTAGCCCGA ACTCTGCACC AACTATCGAT AATGAAGAAA AATCTGAAAT TGAAGCTGAG 
CTAAAAGAGT TAAACCTAAC TCAAGGTGAC ACTGTCGATG CAACAATCGA ACTTGACGAT 
CTGTTTAACG ATGTCGATGA AGATGCACTT AAGCTAGTTG CAACCACTGA CATGCAAGGC 
GTAACGCTTA AGATTGAGCA ACAAGACGAC CTGCATCTAA CGGGCACGCC AGAACTTGCT 
GGTGAGTTCA CCATCACAGT AACGGCTGAT GATGGCATTA ATGCTGCTGT TAAAGCAGAG 
CTAAAAGTTA CTGTTGCTAA TAACGACATC ACGCCAGATC CTGAAGTACA TCCACTGGAA 
GGCAAGAATT GGTATGTGCT AGAGCACGGC AGTGATGATG GTGTTGATAA CAGCTCAGAT 
TTCCAACGTG TTTGGTGTGA AACTTATAAG TTCGTAGACG GTAACGTGTT GATGAACAAG 
CGTAATCTAA GTAACTTAAC CGAATGTGCT GCAGAAACAA CTGAAAAAGT CGGTACCTAT 
ACAGTCAACG GTGACAAGCT TGAAGCTAGC TTTGTGATGG AAGGTGGTGT GGCAGAAGCC 
TCAACTATCA CAGCTAAGCC TGCATTAAAT GGCATTGGCG CTGGCGCTGG CGCACAAACT 
GTTGCTATTC ATGGTGAGCG TTATACCTTC TTCAAAAACG ATGATGACGC AGAGAAACGT 
CTCGATATCG AATCTGATGA CAATGCAAAC GATCGTAGCT TCGCCATTGA AATGCCTGCT 
CTTGAACAAG AAGATGAGCA AAACATCCAG TACAACCTAG TACAGATCAG CTTACAGACC 
AACGATATGG GTGATGACGT TGATATGTAC TTTGATCTTC CAGGCAAAGA CCTAACCTGT 
GAAGAAGTTA GCGAATTCTA TAACCCAACA CTAACAGCAA TAGGTCTACC TAAATACGGT 
GTTTCAGCTC AGCTAATGGA CAATGATAGC GAAGAGTTTA ACTTCTGTGT TGCTCAATTC 
ACCATTAACG AAACAGTTCC AACGGGCACT ATCTTCAGCA TTATTGGCCA ACTAAAGTAT 
GACGACGATG CTGGCATTGT TGAGCCAATC AAGGCTAACA TCGAATGGAC AGGTGAAGCC 
GATAACGAAT AA 

 

Protein sequence

MKKLSLLAAS IGIILAGCSS DDDNAISTFE VKAIDGYLVN ADIYAGDKCD TKAGVTDERG 
IAKIDEKFKD QKLCVKAVVG QTIDSDRGIV TKAFELSAPA DSTVINPMTN LVVEKMQATP 
SLTAEDAKAE VTKQFAALNA KPEQLFGDYI ADANAGNKVA EGIKVIGETL VDAQVEDTDV 
SEVILDDLVT DVADKVESNE DLDDYAPVID KEEGFKPNHR PNITLTDAEQ DKLEEIKLEL 
GQTIATIELL SAFDDKDNDL LTLEVKSEDG ETLAELGLAF NSDTGLLSGK PLTAGEIELH 
VYATDSKGAR SYPLEIEIDV TSPNSAPTID NEEKSEIEAE LKELNLTQGD TVDATIELDD 
LFNDVDEDAL KLVATTDMQG VTLKIEQQDD LHLTGTPELA GEFTITVTAD DGINAAVKAE 
LKVTVANNDI TPDPEVHPLE GKNWYVLEHG SDDGVDNSSD FQRVWCETYK FVDGNVLMNK 
RNLSNLTECA AETTEKVGTY TVNGDKLEAS FVMEGGVAEA STITAKPALN GIGAGAGAQT 
VAIHGERYTF FKNDDDAEKR LDIESDDNAN DRSFAIEMPA LEQEDEQNIQ YNLVQISLQT 
NDMGDDVDMY FDLPGKDLTC EEVSEFYNPT LTAIGLPKYG VSAQLMDNDS EEFNFCVAQF 
TINETVPTGT IFSIIGQLKY DDDAGIVEPI KANIEWTGEA DNE