| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2948 |
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| Symbol | |
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| ID | 5663338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3607988 |
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| End bp | 3609217 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237587 |
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| Product | sodium/glutamate symporter |
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| Protein accession | YP_001502800 |
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| Protein GI | 157962766 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0786] Na+/glutamate symporter |
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| TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCAC AGTTAATTGA AATAAAAGAC TTTGTCTCTT TTACCTTAGC GATAATAGCG
CTATTTATCG GTAAATATAT TATCTCTCGA TACGAGTTAC TCAGAAAGTA CAGTATCCCA
GAGCCTGTTG TTGGCGGCTT TGCTTGCGCC GCGATTGTAG GCATTCTTTA TTATGCCTTC
GATATTCAAA TCGAGTTTAA CCTCGAGATC CGCGATGTGC TATTGCTCTA TTTCTTTGCA
GGTATTGGCT TGAAAGCCGA CTTTGCCACC CTATTAAAGG GCGGAAAGCC GCTACTTATC
TTAATTGCCC TAGCGAGTGT GTTCATCTTC TTGCAAAACT TTACCGGCGT CACCATTGCC
ACCTTGTTTG GTTTAGATCC CAAGGCTGGC TTGATGTCTG GCTCCATTTC ACTCATCGGT
GGGGTTGGCA CTGCCATGGC GTGGACCCCT ACTTTTGTTG AAGAATTGGG TATCGTCAAC
GCCAGTGAGT TGGGTATAGC ATCTAACACC CTAGGACTTA TTTCTGCCTG TGTGATTGGT
GGCCCTATTG CGGCTTACTT GATGAAACGT CATAAGGTGC AAGCTAATCA TGACTCAGAG
CTGGATATTG GTACTAGCCA TCAGGCGGGC TCATCACATA TTAAGGTCGA CTACTTTGGC
GTATTACGAG CTTGGTTATG GTTAAACGTC ACCCTGATTA TTGGCTACTT TATCGATCTG
GCCCTACAAG AGGCAGGGGT TAAACTGCCT ATGTTCGTCG CCTGCCTATT AGCCGGTATT
ATTATCGGTA ATGTAGGAAG AGCCATCATC AATCGCAGAG AGGTCAAAGA TAGAGCCTAC
TTAGATGATG CCTCACAGGG CTTGTCTCTT ATTCAAGATA TCTGTTTGGG TATGTTCCTG
ACCATGGCTT TGATGAGTCT TAAGGTGTGG GAATTAGAGG GCAGCTTACT CTATATATCG
GTGGTCATGT CGGTGCAGGT ATTCTTGTCG GTGGTATTTA CCATTTTTGT GGTATTTAGA
ATGATGGGCA AAGACTATGA GGCGGCAGTG ATTTGCTCAG GTTTTGGTGG CGTGACCTTA
GGTTCGACGG CAACGGCGAT TGTGAATATG ACAGCTGTGA CGCAGCAGTA CGGTGCGGCT
CACAGGGCCT TTATTATCGT GCCGCTAGTC TGTGGCTTCT TTATCGATAT TATCAATGCG
ATGATCATTA ATTTATTCGT CTATTTTTAA
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| Protein sequence | MEPQLIEIKD FVSFTLAIIA LFIGKYIISR YELLRKYSIP EPVVGGFACA AIVGILYYAF
DIQIEFNLEI RDVLLLYFFA GIGLKADFAT LLKGGKPLLI LIALASVFIF LQNFTGVTIA
TLFGLDPKAG LMSGSISLIG GVGTAMAWTP TFVEELGIVN ASELGIASNT LGLISACVIG
GPIAAYLMKR HKVQANHDSE LDIGTSHQAG SSHIKVDYFG VLRAWLWLNV TLIIGYFIDL
ALQEAGVKLP MFVACLLAGI IIGNVGRAII NRREVKDRAY LDDASQGLSL IQDICLGMFL
TMALMSLKVW ELEGSLLYIS VVMSVQVFLS VVFTIFVVFR MMGKDYEAAV ICSGFGGVTL
GSTATAIVNM TAVTQQYGAA HRAFIIVPLV CGFFIDIINA MIINLFVYF
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