Gene Spea_2944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2944 
Symbol 
ID5663334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp3604973 
End bp3605695 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content48% 
IMG OID641237583 
Productnucleoside-diphosphate-sugar epimerase 
Protein accessionYP_001502796 
Protein GI157962762 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCTG CGATCATAGG TGCCACAGGA CTTATCGGAC AACTTCTGCT ACAGAAGTTA 
ATCGACTCGG GTCAATATGA AAATATTCTT CTGCTGGGTA GAAGTCAGCC GCACTACCGT 
AATGAGCATA GCGCAAACGT CTGTTTCATC TCGTGCCAGC TAAGTGAGCT CCCCACTCTA 
GAGTTACCCT TTAGCATCGA TCACGCCTTT TGTTGCCTAG GCACTACGAT TAAAAAAGCC 
GGTAGCCAAG TCGCATTTAT CGCTGTAGAT AAAGTTGCCT GTATCGATTT TATTGCCAAG 
TGCCAGGCCA CGAATAACTA TGTGGTTACG GCGCTCGGGG CCAACAGTCA ATCAAAGACC 
TTCTATAATC GCGTCAAGGG TGAAACTCAA GAGGCGCTTG CTGAACTGCT AAACCAAAGC 
CAAACGCCAA CATCGGCTAA ACGCTTGTGG CTGTTTCAAC CAAGCTTACT ATTGGGTAAG 
CGTAGCGAAG CTCGATTGCT TGAAGATATT GGTAAACAGC TATTTAGACT TATCTCGCCT 
ATGTTTATCG GCCCACTCAA GCAGTATCGA CCTATCGAGG CCGAGAAAGT CGCCAGCGCC 
ATGCTAGCTC ATGCCCTGTC TGTACAAGCT AAGTCAGTAC AAGCCTTGCC TACACAAGAC 
AGGTCTACAC AAGTGACGTC AACTCAGCTT GTCACCCTAG TTTCTAATCG CGAGATGCTC 
TAA
 
Protein sequence
MNAAIIGATG LIGQLLLQKL IDSGQYENIL LLGRSQPHYR NEHSANVCFI SCQLSELPTL 
ELPFSIDHAF CCLGTTIKKA GSQVAFIAVD KVACIDFIAK CQATNNYVVT ALGANSQSKT 
FYNRVKGETQ EALAELLNQS QTPTSAKRLW LFQPSLLLGK RSEARLLEDI GKQLFRLISP 
MFIGPLKQYR PIEAEKVASA MLAHALSVQA KSVQALPTQD RSTQVTSTQL VTLVSNREML