Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2936 |
Symbol | |
ID | 5663326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3596206 |
End bp | 3597759 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641237575 |
Product | histidine kinase |
Protein accession | YP_001502788 |
Protein GI | 157962754 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00120898 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCTAA GAAATAACCC GTTGATGATT CGCCTTAAGC ACTTACCCAG ATTATTACAC TCGTTAAAGG CACGCCTCAT CGTCAGTGCC ATGTTGTTGA TCTTGGTCTT GCTGCCCATC GTGGGACTCA CCCTTAACGA TGCCTTTAAA TTGCAGGTTA AAAGTGCCTC GCTCAAAGAG CTTAAAGCCT ACGTTTACTC CATCTTGGCG GTGACTGAAG TCGACAATCA GCAAGTGTTT ATGCCCGAGG TATTATTAGA AAACCAATTT AATGTGATCC AGTCTGGCCT GTACGCCTTG ATTACCGTCC CCAATCAGCA ACAGCCGCCC AAAACCAGTG AGGACAAGCA AGGAACTAAC TTCGATGCTA AATTTGTTGG GCCAGACACA GACGAGTCCA AAGATGAGAC GATAATGGCT GAGCAAACCG CTGACGGCAG AAAGGTCGCT TGGCGCTCCA ATTCATTGCT TGGCATCGAC CTCACTTCGG CAATCACCAC TGCGGTTCAT ACTGACCCGG TGTTTCCCCA ACCAGAAAAG GGTCAGGGAG AATTCAGCGA AATTATCCTT AACGGTGAAC CCCACTTGGT CTATGGCTTT AGTGTCAGCT TTGAAACGCA ACACACAGGG GCTGATGGAA CAGATGAAAA AACCAGTCGT TTTCCTATCA CTGTCTATAT CATTAAAGAT CAGAGCGACT ATCTGCAGCA GGTTAAGGAG TTTAATCAGC ACCTGTGGCG TTGGTTAATG ATCTTGATGA TTGCCCTTCT CACAATCCAA ATATTATGGC TGTGGTGGAC ACTCAAACCC CTCACTCGCC TGCAGCGTGA ATTAGCAGCA ATTGAAAACG GTAAAGCCGA TCAGCTAGCG GATAATTATC CCACCGAACT GAGCGCCGTT GCCAAGCAGC TCAATACCTT GCTCAATACC GAGCAAAATC AGCGTAAGCG CTATCGTAAT GCGCTCGCAG ATTTAGCCCA TAGCCTTAAA ACACCTTTGG CTGTTATTCA AAGTCAGAAA GATTTAAGTC CACAATCATT TGAGCAGGTC AGCCATATCA ATCGCATTAT CGGCCACCAG CTCAAACGAG CGCAGACGGC GGCGGGGTCG GCGTGGCACT TAGGCGTTGA GGTAGTGGAA GTGTCAGATA AGCTGGTGCG TAACCTGCCC AAAATTTACT GCCAGCCTCC CATCACTATC ACTGAAGAGG TCGACAGGCA CGCCGTCTTT AAAGGTGATG CCAGCGATTT AACCGAGATC TTAGGTAATC TGCTGGACAA TGCCTGTAAG GCTGCTGTCA GCCAAGTGTT ATTAAGCGTT AAAAGCGCCG GTGCGAGTTT AGTTATCAGT ATCGAAGATG ACGGTAAAGG CATCGACGAG AGCCTGCACT CTCAGATTTT TGAGCGGGGA ATTCGAGCCG ACTCCTACCA AACCGGCCAC GGCATAGGTT TGGCAATCGT TCGCGATCTC GTTGACAGTT ATCAAGGGCA ACTGCAGGTT AGTCGCTCGG TTAAACTGGG GGGAGCAAAG TTCGAACTGC GCTTTAACAC CTGA
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Protein sequence | MMLRNNPLMI RLKHLPRLLH SLKARLIVSA MLLILVLLPI VGLTLNDAFK LQVKSASLKE LKAYVYSILA VTEVDNQQVF MPEVLLENQF NVIQSGLYAL ITVPNQQQPP KTSEDKQGTN FDAKFVGPDT DESKDETIMA EQTADGRKVA WRSNSLLGID LTSAITTAVH TDPVFPQPEK GQGEFSEIIL NGEPHLVYGF SVSFETQHTG ADGTDEKTSR FPITVYIIKD QSDYLQQVKE FNQHLWRWLM ILMIALLTIQ ILWLWWTLKP LTRLQRELAA IENGKADQLA DNYPTELSAV AKQLNTLLNT EQNQRKRYRN ALADLAHSLK TPLAVIQSQK DLSPQSFEQV SHINRIIGHQ LKRAQTAAGS AWHLGVEVVE VSDKLVRNLP KIYCQPPITI TEEVDRHAVF KGDASDLTEI LGNLLDNACK AAVSQVLLSV KSAGASLVIS IEDDGKGIDE SLHSQIFERG IRADSYQTGH GIGLAIVRDL VDSYQGQLQV SRSVKLGGAK FELRFNT
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