| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2929 |
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| Symbol | |
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| ID | 5663319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3584266 |
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| End bp | 3586533 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237568 |
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| Product | TonB-dependent heme/hemoglobin receptor family protein |
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| Protein accession | YP_001502781 |
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| Protein GI | 157962747 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.56728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGC TTAAAGTTAG TGTGCTCGCT ATCGCGGTAA GCACAGTGCT CCATGCCCAG
GCTCAAGAGG CCTCTATCGA TTCTCAATCT CCGCAAGCAC CCAATGCTAA AATGCACGAA
GTGATTGTTA TTTCTGGTTC GCGTATGGAA CAGGAAATTG AACAGGTTGC TGGCTCGATT
ATGGTCATCG ATGAAGAAGC CATTGAAAAA AGCATGAGTA ATGACTTTGG TAGCTTGTTC
AGAAATGAGT CCGCTATTGC CGTTAAAGGC GGGGCTGGTA AACCAACCTC TGTGACCATT
CGTGGTATCG GTGGTAACCG TGTAATGATG GTTAAAGACG GTGTACGCGT TAACAACCAA
TATGCTTCAC CGCTAGGTCC TGGCGCTGAA GGCACAGGCC GTGGTCTTAC CGAAGTGCAA
AGCCTAAAGC AAGTAGAAGT CGTTAAAGCC GCCGCATCGA CCATGTATGG CTCTGATGCA
TTGGGTGGCG TGGTCGTGAT GCGTACCAAA GACGCCAGCG ACTACCTAAT GGGTGACGAC
TATTATGTGT CGGTAAATGC TGGCTATGCA GGCGTCAACG ACGAATATGC AGCGGGCTTT
ACCAGTGCGG CAGCCTATGG CGGATTTGAA AACCTGTTGA CCTACCAGCA CCGTACAGGT
GAAGAACAGC CTAATTACTA TGACACTCAG CCAGACAGTG ATCTTGTGCA AGACAGTGTA
CTGTTCAAGA GTAAATACCA TTTCAATGAC TACACCTCGG TGCAGCTGAC CCTAGATTAT
CTAGAACAGA CCCTAAAGCG CTGGCAATAC GAATTCGATA AGGTCGGTGA ACTGGACGAA
AATATCGATA CCGACCGTGA CACTCAAGTC AATAACGGCG CGCTACAGCT AGTATCAAGC
AAGCCAACTC AAATGCACGA CACCCTAACG GTGACTGCTT ACTTTGGCCA AACCGAACAG
TTAGAGCATA GAGACTATTT CGAATGGAAT AAGGCGAACA CTGTTTACGG TTTAAGCGAA
GTCCGAGATT ACAGCTTCGA AGACCAACGT ATCGGGCTTA ATAGTACTTT TAGCAAATAT
GTTGGTGGCG ACAACTATGG TCATCAGATC ACCTATGGTC TGGACTATGA GTTTTCCACC
ATGTCACGTC ACCGTACGGT AAATAACTCT CTTACAGGCG AAACGACGAC ACCGTTTACC
TTTGCCACGA CCGACAGCCA ACGCCTAGGT GTGTTTGTGC AGGACGATGT CACTCTACTT
GATGGTGATT TAAATCTAAT CGCGGGTCTA CGTTACGACT ATTTCGATAA CACGCCAGAT
CAACAACAAG CTATAGATGC AGGTAAAGAT CCGGCAGATT TTCAGAGCAT GAGTGATAAC
TTCTGGTCAC CTAAGCTGGG CCTTGTTTAT CAGTTATCAG ACTCTGTAAG TGTCTATGGT
CAGTACGCTT ATGGCTACAA GATGCCAACC CCGGATCAGA AATGGGGTGA ACTTGAAGTC
GATGCAGGTT CGATGACAGA TGTGCTTATT CAGGCTAACT ATGATCTAGA GTCTGAGCAA
TCTCATACCT GGGAAATCGG CGTTCGTGGC AATCATAGCG ACACAAATTA TGAACTAACT
GCCTTTTATA CTCAGGCCAA AGACTTTATT GACTGGCAGT ATGTGAGCTA TAAGCCTCCT
GTATTTTTCC CAGTGATGAA GCCTATGGAG TTTAAGTACC AGTACTACAA CCGCGATGAA
GTGATCTTGT ACGGCGCTGA AGCTCAGGTT AACCATTGGC TAACCGATAG CATTGAGTTA
TGGGGTAACA TCTCTTACAC CTATGGTGAA GATGAAAATG GCGATTACCT TAACAGTGTC
AGCCCACTCA AGGGTAACGC GGGTATTAAC TGGTATACCG ACATCGCCGA TATGGAAGCA
GACTTTGCCG CAGTAGTGCG CTGGGCGGAT GATATGAGCC GGACTAATGA CATTGAATTA
GCCGAGGATG ATATTTGTGC CATGGGGATC TGTATTCCTA AAGAGCAGTT TAATGAGGTA
TACGGAACAG CGGGTTATGC GGTTATGGAT CTGACCTTTG GCTTACGTAT TGATGATAAC
TGGAAACTAC GCGCGGGTGT TTATAACCTG TTCGATAAAG AGTATATCGA TTATGCCGAT
GTGGCTGGCC AATCAGTATT CTTACTAGGT GCGAGTATGG ACTTAGAAAA AGAAGACTTT
ACCCAGCCGG GTCGCTACTT CAACGTGAGC GTGAACTATC AGTTCTAG
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| Protein sequence | MNKLKVSVLA IAVSTVLHAQ AQEASIDSQS PQAPNAKMHE VIVISGSRME QEIEQVAGSI
MVIDEEAIEK SMSNDFGSLF RNESAIAVKG GAGKPTSVTI RGIGGNRVMM VKDGVRVNNQ
YASPLGPGAE GTGRGLTEVQ SLKQVEVVKA AASTMYGSDA LGGVVVMRTK DASDYLMGDD
YYVSVNAGYA GVNDEYAAGF TSAAAYGGFE NLLTYQHRTG EEQPNYYDTQ PDSDLVQDSV
LFKSKYHFND YTSVQLTLDY LEQTLKRWQY EFDKVGELDE NIDTDRDTQV NNGALQLVSS
KPTQMHDTLT VTAYFGQTEQ LEHRDYFEWN KANTVYGLSE VRDYSFEDQR IGLNSTFSKY
VGGDNYGHQI TYGLDYEFST MSRHRTVNNS LTGETTTPFT FATTDSQRLG VFVQDDVTLL
DGDLNLIAGL RYDYFDNTPD QQQAIDAGKD PADFQSMSDN FWSPKLGLVY QLSDSVSVYG
QYAYGYKMPT PDQKWGELEV DAGSMTDVLI QANYDLESEQ SHTWEIGVRG NHSDTNYELT
AFYTQAKDFI DWQYVSYKPP VFFPVMKPME FKYQYYNRDE VILYGAEAQV NHWLTDSIEL
WGNISYTYGE DENGDYLNSV SPLKGNAGIN WYTDIADMEA DFAAVVRWAD DMSRTNDIEL
AEDDICAMGI CIPKEQFNEV YGTAGYAVMD LTFGLRIDDN WKLRAGVYNL FDKEYIDYAD
VAGQSVFLLG ASMDLEKEDF TQPGRYFNVS VNYQF
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