| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2926 |
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| Symbol | |
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| ID | 5663316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3579604 |
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| End bp | 3581010 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641237565 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001502778 |
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| Protein GI | 157962744 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGTTTT CTAAGCTTGG ATTAAGCACA CCTATCGTTA AAGCCGTTAC CGAGCAAGGC
TACACTAGCC CTACTCCTAT TCAAGCTAAG ACCATTCCCG TTATATTAAG TCAACGCAAC
TTGATTGCCG CTGCGCAAAC CGGTACGGGT AAAACCGCCA GTTTTGTACT ACCAATTCTA
GAGATGCTGA GTAAGAGCGA GACCCAGCGT AAGAAGCGCA TTCGCGCCTT AATACTTACG
CCAACTCGTG AGCTCGCGGT GCAGGTTGAA GACAACATCA GTCAATACGG CAAGCATTTA
GATCTGACGT CAATGGCCAT GTATGGCGGC GTCGACTCTA AGCCTCAGCG TGAGCGCTTA
ATCCAAGGTG TCGACATCTT AGTCGCGACG CCGGGGCGTT TACTCGACAT GTATACCCAG
CGCGCAATTC ATTTCGATGA GCTAGAATTT CTAGTACTCG ATGAAGCCGA TAGAATGCTG
GATATGGGCT TTATTGAAGA CATCAATAAG ATCATCGAAA AGCTGCCAGT CGATAGACAG
AGCCTGCTTT TCTCGGCGAC CTTATCACGC CAAGTAAAAG AGCTGGCAAG AGCGACCATC
ACTCGTCCAA TCGAGATTTC GGTCACCCAT AACACTGATA ACAAGCCTAA GATTGAGCAG
TGGTTAGTTA CCGTAGATAA AGACAAGAAG TCAGCCTTAT TAAGCCACTT AATTCAAGAG
AATAACTGGC AACAGGCGCT TATTTTTATT GAGACTAAGC AAGGCGCAGC CAAGCTGGTG
AGCCAGCTTG AAAAACGTGG CATTACGGCT GAATGTATCC ATGGAGGCCG TAGCCAAGAG
ATCCGTGAGC AAATTCTGGC AGACTTTAAG TCCGGTAAAA TTGGCTTATT GATTGCTACA
GGTATTGCCG CCCGAGGTTT GGATATCGAT GAGTTGCCTT TAGTGATTAA CTACGACTTG
CCATATCCTG CAGATGAATA TATTCACCGT ATCGGCCGTA CTGGTCGTGC AGGTGCTAAC
GGTGAAGCGG TAGCGCTGGT ATCTAAAGAT GACTTTAAAA ACCTGTGTAT GATTGAGACC
CGTTTAGGCC ATTTGATTGA ACGCAGAGAA ATTGAAGGCT TTGCGCCACG TAAAGAAGTG
CCAATCTCAA TTCTGAATTT TAAGCCAAAG AGCAAACAAA TTACTGGCGC CGATAGCAAG
CCAACAAGTG ATAAAAAGCC TGCGAGAGAC ACTCGCCGCA CATCAGCGCA CGAGACTAAA
GTTCATGGAG CTAAAGTTCA TGGAGCTAAG ACTCACAAGG TGAAAGTTGA TAGAGCTAAT
ACTGATACAA CTAAAGCAGG TAATGCTAGC AGTGATAGTT TACCGCAAGA TCCTTGGGCA
TTTTCAAAGT CAAAGTTAAC CAAATAG
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| Protein sequence | MPFSKLGLST PIVKAVTEQG YTSPTPIQAK TIPVILSQRN LIAAAQTGTG KTASFVLPIL
EMLSKSETQR KKRIRALILT PTRELAVQVE DNISQYGKHL DLTSMAMYGG VDSKPQRERL
IQGVDILVAT PGRLLDMYTQ RAIHFDELEF LVLDEADRML DMGFIEDINK IIEKLPVDRQ
SLLFSATLSR QVKELARATI TRPIEISVTH NTDNKPKIEQ WLVTVDKDKK SALLSHLIQE
NNWQQALIFI ETKQGAAKLV SQLEKRGITA ECIHGGRSQE IREQILADFK SGKIGLLIAT
GIAARGLDID ELPLVINYDL PYPADEYIHR IGRTGRAGAN GEAVALVSKD DFKNLCMIET
RLGHLIERRE IEGFAPRKEV PISILNFKPK SKQITGADSK PTSDKKPARD TRRTSAHETK
VHGAKVHGAK THKVKVDRAN TDTTKAGNAS SDSLPQDPWA FSKSKLTK
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