| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2912 |
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| Symbol | |
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| ID | 5664798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3563264 |
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| End bp | 3564886 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641237551 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001502764 |
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| Protein GI | 157962730 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTGCCA GCGCCGTATT TGCCTACCGG ATCTGGGTAC AGGCTCCAGC TATTGAGCGC
TCATTATTAA AAGTATCCGA GCAAGAGCTC GTTGCATTAA ATTTCGCCTT TGAACAGATG
AGCAAGCCAC TGCATACCAT CAATTACGAC TATGCAGTTT GGGATCGAAC CTACAGTTAT
ATGAAATCAA ACAGTGTTGC GGATAAGCGA TATTATGAGC AACACGAATA CCCAGATGAC
ACCTTTAAAA GTTTAAAAGT TGATGGCGTA TTTATCTTCG ATAACCAAAA TAATGTCGTT
TTTAATAAGG GGTTTCGCCA CAATAGCGAG CATGAGAAGC TTCAATTTGA TTTGATGAAC
TTTGCAGAGT CGCCTGAAAA TAAGCTCCTC TCACCTCTGA ATAAAATAGC CCTACCGCCT
CAGGAGCATC CTTTTAGCCA CCCCAGTAGT GTGCCGACGA AAAGTGGGCT TATCGCCACA
AAATATGGCC CAGCGCTATA CAATTCCAGC AGTATTTTAC AGTCTGACCG CACCGGGCCA
ATTATGGGCT ACATTGTGTT TATCCGGCTC ATTGATGAAG AATTTATGGC AGAGCTATCT
AAGTATACTG CTGCTGGCAT AGAAATGAGT GTGGTAACAG CTTCTGACGA TGTCGCTCAA
ATTCCCTATT TAGGCGCGGA TTTTGAATTA ACTAAATTGC ATGCGATTTC AGAGCGGCTT
GTACGTAATA TTGACGGCCA ACCATTGATA AAGTTTACCT TATATCACAC CGATGCCGAG
CCCTCCCCTA TATTAGGTAG CGATATCTAT ATCCTATTGG CAGAAATGTC AGTATTGCTA
TTATTAGCCT ACTACCTCTA TTCATACTTC TTAGTGCATC CAGTAAGAAA GCTTGCTGTC
GATATTGAAG AGATGGCTAA GAGCCGAGAG ATTAAAAAGC TCAAACACCG CTATCCAATA
ACTGAGTTAG TGAACGTTGC CACTCACTTC AACGCACTTA TGGGCACGAT TCAAGAACAA
ACAAAACAGC TCAACGAGCA AGTTTACATA GATAAGCTAA CCAATATTCC TAATCGCCGT
GGATTTGAGC AAAGGCTAGA AACTTATTGC CAACTGCTCG CTCGGCAACA AATTGGCTTT
ACCCTGATCA TTGCCGACGT GGATCACTTC AAAGAGTATA ACGACACCCT TGGTCATTTA
GCCGGTGATG AGGCGCTGGT CAAAGTCGCT CAAACCTTGA GTCAGCAATT TTACCGTGCA
GACGACATAT GCGCGCGTTT CGGTGGAGAA GAGTTTATTA TGCTCTACCG TGATATTCCT
GACGAGCCGC TGCAACGTAA ACTAGACGCC ATGCTGCAGA GCTTTGAAGA TTTAGCATTC
CCCCACCCAA GCTCGAAAAC GGCTAAGTAT GTCACTGTCA GCCTTGGTGT CTGTAAAGTG
TTAGCGGTCG AAGATTTTGA GTTCAAAAGT GACGCTAATA TTATTGGCCG TCAAGCCGCA
TTACTAGCAG ATAAAGCCTT ATATCAAGCA AAGGCCTGTG GCCGCAATCA ATACAAGAAG
GTCAGCCTAT TAATCGATGA AATAGAAGCA TTAGAAAGCA ATCACCCGAG CGCTCGACCA
TAA
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| Protein sequence | MFASAVFAYR IWVQAPAIER SLLKVSEQEL VALNFAFEQM SKPLHTINYD YAVWDRTYSY
MKSNSVADKR YYEQHEYPDD TFKSLKVDGV FIFDNQNNVV FNKGFRHNSE HEKLQFDLMN
FAESPENKLL SPLNKIALPP QEHPFSHPSS VPTKSGLIAT KYGPALYNSS SILQSDRTGP
IMGYIVFIRL IDEEFMAELS KYTAAGIEMS VVTASDDVAQ IPYLGADFEL TKLHAISERL
VRNIDGQPLI KFTLYHTDAE PSPILGSDIY ILLAEMSVLL LLAYYLYSYF LVHPVRKLAV
DIEEMAKSRE IKKLKHRYPI TELVNVATHF NALMGTIQEQ TKQLNEQVYI DKLTNIPNRR
GFEQRLETYC QLLARQQIGF TLIIADVDHF KEYNDTLGHL AGDEALVKVA QTLSQQFYRA
DDICARFGGE EFIMLYRDIP DEPLQRKLDA MLQSFEDLAF PHPSSKTAKY VTVSLGVCKV
LAVEDFEFKS DANIIGRQAA LLADKALYQA KACGRNQYKK VSLLIDEIEA LESNHPSARP
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