| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2910 |
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| Symbol | |
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| ID | 5663301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3560820 |
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| End bp | 3562448 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641237550 |
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| Product | PfaD family protein |
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| Protein accession | YP_001502763 |
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| Protein GI | 157962729 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR02814] PfaD family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCTA CTACAACCAG CGAAATGCTT TCACCGTGGC CATGGGCTGT GACAGAGTCA
AATATTAGCT TTGACGTGCA AGTGATGGAG CAGCAGTTAA AAGACTTTAG CCGTGGCTGC
TACGTGGTAA ATCACAGCGA AAATGGTGTT GGTATCGCCC AGTCTGCAGC AATCGTATCA
GAGCAGGCAG CTAACAACAC AGGGCTGCCA GTCAGTGCCT TTGCCCCTGC TCTTGGTACA
GAAAGCCTAG GCGACAGTAA TTTCCGCCGC GTTCACGGTG TTAAATACGC CTACTACGCG
GGCGCAATGG CGAATGGTAT TTCATCGGAA GAGCTGGTTA TCGCACTGGG TAACGCCGGT
ATTTTATGTT CATTTGGCGC AGCGGGTCTT ATTCCAAGCC GCGTCGAACA GGCGATAAAC
CGCATCCAAG CAGCGCTGCC AAACGGTCCA TACATGTTTA ACCTTATCCA TAGCCCAAGT
GAGCCAGCGC TAGAGCGCGG CAGCGTTGAG CTATTTTTAA AGCATAAGGT TCGCACCGTT
GAAGCATCGG CGTTCTTAGG CTTAACGCCA CAAATCGTTT ATTACCGCGC CGCAGGCCTA
AGCCGCGATG CCCAAGGTAA AATCGTTGTC GCTAACAAGG TTATCGCTAA AGTAAGCCGC
ACTGAAGTAG CTGAAAAATT CATGATGCCT GCACCAGCCA AGATGCTACA AAAACTGGTT
GATGACGGTT CAATCACGCC TGAGCAGATG GAGCTTGCGC TACTTGTCCC TATGGCCGAC
GACATCACTG CAGAAGCCGA CTCTGGTGGT CACACAGATA ACCGTCCATT GGTCACATTG
CTGCCGACTA TCTTGGCACT AAAAGATGAG ATCCAAGCAA AATTCAATTA CCCAACACCA
ATCCGCGTCG GTTGTGGTGG CGGTGTTGGT ACACCCGATG CAGCGCTTGC GACCTTCAAC
ATGGGCGCAG CCTATATTGT GACTGGTTCG GTTAACCAAG CCTGCGTCGA AGCCGGCGCT
AGCGATCATA CCCGTAAACT GCTAGCGACT ACTGAGATGG CCGATGTCAC CATGGCGCCA
GCGGCTGATA TGTTCGAGAT GGGCGTTAAG CTACAGGTGG TTAAGCGCGG TACGCTTTTC
CCAATGCGAG CTAATAAACT GTACGAGATC TACACCCGTT ACGACTCAAT CGAAGCGATT
CCGGCGGATG AACGCGAAAA GTTAGAGAAG CAAGTATTCC GCTCAAGCCT TGATGAAATC
TGGGCGGGCA CAGTTGCACA CTTTAATGAG CGCGATCCTA AGCAGATTGA GCGCGCCGAG
GGTAACCCAA AGCGTAAGAT GGCACTTATC TTCCGCTGGT ACCTAGGGCT TTCGAGCCGC
TGGTCTAATT CTGGCGAAGT AGGCCGTGAG ATGGATTACC AAATTTGGGC TGGCCCTGCA
CTTGGGGCGT TTAACCAATG GGCTAAAGGC AGTTACCTAG ATAACTACCA AGACCGTAAT
GCCGTCGACG TAGCTAAGCA CCTAATGTAT GGCGCGGCTT ACCTAAGCCG AATTAACTCA
TTAACTGCAC AAGGCGTTAA ACTACCAGCA AGCCTATTAC GCTGGAAGCC GACCCAAAGA
ATGGCTTAA
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| Protein sequence | MNPTTTSEML SPWPWAVTES NISFDVQVME QQLKDFSRGC YVVNHSENGV GIAQSAAIVS
EQAANNTGLP VSAFAPALGT ESLGDSNFRR VHGVKYAYYA GAMANGISSE ELVIALGNAG
ILCSFGAAGL IPSRVEQAIN RIQAALPNGP YMFNLIHSPS EPALERGSVE LFLKHKVRTV
EASAFLGLTP QIVYYRAAGL SRDAQGKIVV ANKVIAKVSR TEVAEKFMMP APAKMLQKLV
DDGSITPEQM ELALLVPMAD DITAEADSGG HTDNRPLVTL LPTILALKDE IQAKFNYPTP
IRVGCGGGVG TPDAALATFN MGAAYIVTGS VNQACVEAGA SDHTRKLLAT TEMADVTMAP
AADMFEMGVK LQVVKRGTLF PMRANKLYEI YTRYDSIEAI PADEREKLEK QVFRSSLDEI
WAGTVAHFNE RDPKQIERAE GNPKRKMALI FRWYLGLSSR WSNSGEVGRE MDYQIWAGPA
LGAFNQWAKG SYLDNYQDRN AVDVAKHLMY GAAYLSRINS LTAQGVKLPA SLLRWKPTQR
MA
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