Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2906 |
Symbol | |
ID | 5663297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3543574 |
End bp | 3544440 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641237546 |
Product | transcriptional regulator, putative |
Protein accession | YP_001502759 |
Protein GI | 157962725 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAAAA CAAGCAGTAA ACACTTGAGG GAAGAAAACA ACAACCCGAA TGAGTGTACG CAACATGAGG CGGAAACAAG GCATAGTAAC GCCACAACAA CGCCAGAGAT GCGCCGATTC ATCCAGGAAT CGGATCTCAG TGTCAGCCAA TTATCTAAGA TACTGAATAT CAGTGAAGCC ACCGTTCGCA AATGGCGTAA ACGCGACTCT GTCGAAAACT GTCCAAATAC ACCTCACCAC CTTAATACCA CGTTAACCCC CCTACAGGAG TACGTGGTGG TTGGACTGCG TTATCAACTG AAGATGCCGC TAGATACCCT ATTAAAAGCC ACGCAAAAAT TTATTAATCC GAATGTATCC CGTTCTGGCT TAGCAAGGTG CTTAAAGCGC TATGGTGTTT CTAGGGTCAG CGATATTGAA AGTCCCCATG TCCCCATGCA TTACTTCAAT CAGATCCCCG TCACCCAAGG CAGCGATGTG CAAACCTACA CCTTGCACTA TGAAACACTC GCGAAAACCT TGGCCTTGCC TAGCAACGAC GGCGACAATG TGGTTCAGGT GGTTTCACTC ACCATTCCAC CGAAATTGAC AGATGCAACA CCCAGTTCAA TTTTGCTCGG AATCGATCCA CATAGTGATT GGATCTATCT CGACATCTAT CAAGACGGCA ATACCCAAGC CACCAACCGT TATATGGCCT ACGTGCTTAA GCATGGGCCG TTCCATCTTC GAAAGTTACT CGTGCGTAAC TATCACACCT TTTTACAGCG CTTTCCTGGT GCGACGCCAA ATCGCCACAC CTCTAAAGAA ACGCTTATAA CAAACAACAA GACGCCTGAC ACTCAGGCAC CCAGCGGAGA CTCATAA
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Protein sequence | MVKTSSKHLR EENNNPNECT QHEAETRHSN ATTTPEMRRF IQESDLSVSQ LSKILNISEA TVRKWRKRDS VENCPNTPHH LNTTLTPLQE YVVVGLRYQL KMPLDTLLKA TQKFINPNVS RSGLARCLKR YGVSRVSDIE SPHVPMHYFN QIPVTQGSDV QTYTLHYETL AKTLALPSND GDNVVQVVSL TIPPKLTDAT PSSILLGIDP HSDWIYLDIY QDGNTQATNR YMAYVLKHGP FHLRKLLVRN YHTFLQRFPG ATPNRHTSKE TLITNNKTPD TQAPSGDS
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