| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2864 |
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| Symbol | |
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| ID | 5663255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3497086 |
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| End bp | 3498798 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641237504 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001502717 |
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| Protein GI | 157962683 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.254717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTAA GCAAGTACCT GCTATCAACT CAAAAAGAAA CTCCTGCAAA CGCAGAAGTC
GTTAGTCATC AGTTAATGTT ACGTGCGGGC ATGATCCGTC GTAACGCATC AGGCTTATAC
AGCTGGTTGC CGACAGGTTT GCGTGTACTA CGTAAAATCG AAGCGATTGT TCGTGAAGAA
ATGAACAAGG CCGGCTCAGT TGAAATTCTT ATGCCTATGG TTCAACCAGC TGACCTTTGG
GTTGAAACGG GTCGTTTTGA AAAATTTGGT CCTGAGCTAC TTCGTTTCCA AGACCGTCAC
AACCGTGACT TCGTACTTGG CCCAACTCAC GAAGAAGTGA TCACCGATAT CGTGCGTAAA
GAGGTTAACT CATACAAGCA GTTACCACTT AACCTATACC AAATTCAAAC CAAATTCCGT
GACGAAGTTC GTCCACGTTT TGGTGTAATG CGTTCACGTG AATTCTTGAT GAAAGATGCA
TATTCTTTCC ATATCGATCA AGAAACTATG GATGAAACCT ATGAAGCGAT GTTCCAAGCT
TATAGCAACA TTCTTACTCG CTTAGGCCTA GCTTTCCGTC CAGTTATGGC TGATACGGGT
TCTATCGGTG GCAGCATGTC ACACGAGTTC CACGTATTGG CTAACAGTGG TGAAGACTTA
ATCGCTTACT CAACGGAAAG CGATTACGCG GCAAACATTG AAAAATGTGA AGCGCCTCTG
CCAACTGAAA CACGTCAAGC CGCAACCAGC GAAATGACGT TAGTTGACAC ACCAAACGCT
AAGACAATTG CTGAACTTGT AGAACAGCAC GGTATTGCGA TTGAGAAAAC AGTTAAGACA
CTAATCGTTA AAGGTGCGAC TGAAGAAGCG CCATTAGTGG CTATCGTTAT TCGTGGCGAC
CACGAGCTAA ACGAAGTTAA AGCTGAAAAG TTAGATGCAG TATTAGCACC ATTTGAGTTT
GCTGATGAAG CGGCTATCCG TGATGCTATT GGCGCAGGCA CAGGTTCTAT CGGTCCTGTT
GGCCTAAATA TGCCAGTATT TGTTGACCAC AGCGTTAGCA TCATGAGCGA CTTTGGCGCC
GGTGCAAACC AAGATGGCAA GCACTACTTC GGCATTAACT GGGAGCGCGA TCTACCAGAA
GCACCAGCAT TCGATTTACG TAACATCATC GAAGGTGAGC CTAGCCCATG TGGTAAAGGC
ACTATCGCCC TACTTCGCGG TATTGAAGTC GGCCATATCT TCCAGTTAGG TACTAACTAC
TCTGAAGCGA TGAATGCCAA CGTACTTGAC CAAAATGGTA AGTCACAGAC TCTACTAATG
GGTTGTTACG GTGTGGGTGT AAGCCGTATG GTAGCTGCTG CAATTGAGCA AAACAATGAT
GATCGCGGTA TTATCTGGCC TGAAGCGATT GCACCGTTCA CAGTTGGTAT TTTGCCAATG
AACATGCACA AGTCGCATCG CGTTAAAGAT ATCGCAGAGC AGCTTTATCA AGACCTAAAC
GATGCAGGTA TCGAAGTGAT GTTCGATGAC CGTAAAGAGC GTCCAGGCGT GATGTTTGCT
GATATGGAGC TTATCGGTAT TCCACACGTT GTGGTTATTG GTGATCGTAA CATCGATAAC
GGCATGTTCG AATACAAGAA CCGTCGTACT GGTGAGAAGC AAGATATTCC ACTAGACCAA
ATCGTTGAGT TCTTAAAAGC GCAACAAGCT TAA
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| Protein sequence | MRVSKYLLST QKETPANAEV VSHQLMLRAG MIRRNASGLY SWLPTGLRVL RKIEAIVREE
MNKAGSVEIL MPMVQPADLW VETGRFEKFG PELLRFQDRH NRDFVLGPTH EEVITDIVRK
EVNSYKQLPL NLYQIQTKFR DEVRPRFGVM RSREFLMKDA YSFHIDQETM DETYEAMFQA
YSNILTRLGL AFRPVMADTG SIGGSMSHEF HVLANSGEDL IAYSTESDYA ANIEKCEAPL
PTETRQAATS EMTLVDTPNA KTIAELVEQH GIAIEKTVKT LIVKGATEEA PLVAIVIRGD
HELNEVKAEK LDAVLAPFEF ADEAAIRDAI GAGTGSIGPV GLNMPVFVDH SVSIMSDFGA
GANQDGKHYF GINWERDLPE APAFDLRNII EGEPSPCGKG TIALLRGIEV GHIFQLGTNY
SEAMNANVLD QNGKSQTLLM GCYGVGVSRM VAAAIEQNND DRGIIWPEAI APFTVGILPM
NMHKSHRVKD IAEQLYQDLN DAGIEVMFDD RKERPGVMFA DMELIGIPHV VVIGDRNIDN
GMFEYKNRRT GEKQDIPLDQ IVEFLKAQQA
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