Gene Spea_2851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2851 
Symbol 
ID5663242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp3480105 
End bp3480683 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content44% 
IMG OID641237491 
Productthymidine kinase 
Protein accessionYP_001502704 
Protein GI157962670 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.516572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGCAGC TATATTTCTA TTACTCAGCG ATGAATGCGG GTAAATCAAC TTCGTTATTG 
CAGTCTTCTT ATAATTACCG CGAACGCGGA ATGCATACCT TAGTGATGAC AGCGTCAATT 
GACGATCGTT ATGGTGTGGG TAAAGTGGCT TCACGTCTAG GTATCGAAAC CGACGCTCAA 
GTCTTTGGTA GCAACGATAA TCTGACTCAG ATGATCAGCA CTAGCCACGC CGAAAAGACC 
TTACACTGTA TATTGATTGA TGAATCTCAG TTCTTAAGCA AAGAGCAGGT TAAGCAATTA 
ACTTATGTAG TCGACATTCT CGACATTCCA GTGCTTTGTT ATGGCCTGAA AACTGACTTT 
CAGGGCGAAT TATTCAGTGG TAGTCAATAT TTGTTAGCTT GGGCAGACAA ATTAGTTGAG 
CTAAAAACCA TTTGTCATTG CGGCCGTAAA GCCAATATGG TGGTGCGCCT CGATGGTAAT 
GGTAAGCCAA TGCGTGAAGG TGAGCAGGTG GCGATTGGTG GTAACGAAAG CTACGAGTCT 
GTGTGCCGTA AGCACTTCAG GGAATTTATC TGGGATTAG
 
Protein sequence
MAQLYFYYSA MNAGKSTSLL QSSYNYRERG MHTLVMTASI DDRYGVGKVA SRLGIETDAQ 
VFGSNDNLTQ MISTSHAEKT LHCILIDESQ FLSKEQVKQL TYVVDILDIP VLCYGLKTDF 
QGELFSGSQY LLAWADKLVE LKTICHCGRK ANMVVRLDGN GKPMREGEQV AIGGNESYES 
VCRKHFREFI WD