| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2843 |
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| Symbol | |
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| ID | 5663234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3467818 |
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| End bp | 3470160 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641237483 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001502696 |
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| Protein GI | 157962662 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAAA TCAAACCAAT TGTTACGGCT ATTTCATTCG CTATGGCTAG CTCTTTGTCG
CCAGTTATAG CACAAGAAAA AACAGAAGAT GAAACCGTCA ATGACTCAGA AATTGAAGTA
ATTTCTGTTA TGGCAACGAA ACGTGCACAA TCTATTCAAG AAGTGCCTAT TTCTGTGGTC
GCCTTCAGTG GTGAAGACAT GGTTAAATCA GGCATAGAAG AGGTGGCTGA TCTTGGCGCA
TTTACCCCTA ATTTATATGT ATCAAAATCA AGTATGCAAG TTAGTCAGAC TATAGGTATT
CGTGGTGTAG GCACCTCTTC TAACGCCGCT TTAGAGCCAA GTGTTGCCAC CTACATTGAT
GGGGTATATA TGCCTCGGCC TGGTGCTTTA CTGGGATCAT TTACAGATAT TGAAATGGTT
GAAGTATTAC GTGGCCCGCA AGGGACATTG TTCGGTCGTA ATGCGTCGAT TGGTGTGGTG
AATATACGAA GTAAATCCCC AGAGCTTGGT GAAAATTATA CTGATATCTC CATGGGCGTA
GGTAACTTTG GCGCACTAGA TACCGCTATT ACGGCCAATG CTAGCTTAAC CAATAACTTA
GCGGTGCGAG GTAACTTAAA CTATAGCGCT GATGACGGTT ACGGAGAAAA CTTATACGAT
GGAAACGACA AGTTAGGTGA GAATGACAGT AGCCTAGCAA GATTATCTTT CCTTTATCAA
GCGTCAGATG ATTTTAATGC CTTAGTAAAA TTTGATTATC AAAAGCTTAA CGGTACGGGG
TCACCGATAG AAGTTTTACC TGAATCAGCA ACACCAGAAA GGCTTCAAGT GCTCAATTAC
TTAGGAGCAG TGCCTGATTT ATCGGGGATA GATGGGGTTG TTAATCAAGT CCATGACGAT
AGTATGGAAA GTTCCCAGTG GGGCACCATG CTGGAAATGA ATTGGAACAA CCTGCTTACA
GATTATTCTA TTAAATCAAT AACTTCATAT AGAGATTGGA GTAACAATAC CCTCGAAGGT
GATATAACAA GGCTACCACT TGATTTAGCC GCCAGACAAT CAGATTATTC TAGCCGTTCA
TTTAGCCAAG AGTTACAGTT TATTTCGCCA ATTGGTGAAA CATACGACTA CATTACCGGT
GTGTATTTTA GCAAAGAGAG TTATAGCATT GATCAAACCT TTCATTTAGG TGCGGCTTTC
TGTCCTGTTG GCGTTGGCGC ATCGCTTGCT GGAATGCCAC CCGCTCTTAT CCAAGCGACA
ATCACTGCTT GTTTAGCAAT GCCGCAAGAA AATGCAACCC CTGCAGCTTT CTCACAAACA
ACAGAATCCT TGGCGGCTTT CTACCAAGGT ACTTGGCACT TGAATGATAA ACTAGATATT
ACTGCAGGTA TTCGATACAC CGACGATAGT AAAAGTGCTG ATATGCTGGT CGCACCAACA
AACCTTGTCG CTGGCGCTCT TTTAGCAGGA GCAGAAGATC ATCAGCTTAG CTTTGATGAC
TCACAAGTGA CTTGGTTATT AAACAGTAAA TACCAGTTTG ACCAAGACTT AATGATGTTT
GCAACAGTTT CAACTGGTTT CAAATCGGGT GGCTTTAATT CTGTTATGAC ACAAGGCGGA
CTGACGGCCG ATGAGCGAAC AATAGACTCA GAAGAAGTAA TTAATTATGA AATTGGGGCA
AGATCTACCT TATTTGAAGG GGTCATGACA ACTAATGCTA CATTGTACCG AACCGAAATA
GATAACTTTC AAGACCGCTC TTTTAAAGGC TTAAACTTTA TTACCAGTAA TGTTGGTAAA
TTAAGGCAGC AAGGGTTAGA GCTCGAAATG AACGTTTATC CCACCGATGA ATTAACCTTG
AGAGCTTCAT ATGCTTATTT AGACTCAGCA TTTCTTGATT ACAAAGACGC AACCAACCTC
CCGGGTATAC CCGGTCCACA AGATTTAACA GGAACACCGA ATAATCGTTC CCCTAAAAAT
CAATTGAGTG CCTTTGCTGA ATATGCGGAT ACGTTTTCAA GTGCGAATTT AGGTTGGTAT
GCACGTATTG AATCAAATTG GCAAGATGAT TCTAATGTTG GCTCAACTAC AAATAATAAT
CCTCAGGATA TTCAAGAAGC TTTTGCTTTA ACCAATATCA GACTTGGGCT TTTAGGCAGC
AATGAGGATT GGAGTGTGCA ACTTTATGCT GAAAATGTGA CTAATGAATC TTATTGTCAA
AATACCTTTA ACCAACCTTT TGGTGATCAG TTTGGTACGG TAAGCAATGG TGGCACACTT
ATTCGATGTG TCATGGGAAC ACCAAGGACC TTTGGTCTTC GCGCTAGCTA CCACTTTGAA
TAA
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| Protein sequence | MYKIKPIVTA ISFAMASSLS PVIAQEKTED ETVNDSEIEV ISVMATKRAQ SIQEVPISVV
AFSGEDMVKS GIEEVADLGA FTPNLYVSKS SMQVSQTIGI RGVGTSSNAA LEPSVATYID
GVYMPRPGAL LGSFTDIEMV EVLRGPQGTL FGRNASIGVV NIRSKSPELG ENYTDISMGV
GNFGALDTAI TANASLTNNL AVRGNLNYSA DDGYGENLYD GNDKLGENDS SLARLSFLYQ
ASDDFNALVK FDYQKLNGTG SPIEVLPESA TPERLQVLNY LGAVPDLSGI DGVVNQVHDD
SMESSQWGTM LEMNWNNLLT DYSIKSITSY RDWSNNTLEG DITRLPLDLA ARQSDYSSRS
FSQELQFISP IGETYDYITG VYFSKESYSI DQTFHLGAAF CPVGVGASLA GMPPALIQAT
ITACLAMPQE NATPAAFSQT TESLAAFYQG TWHLNDKLDI TAGIRYTDDS KSADMLVAPT
NLVAGALLAG AEDHQLSFDD SQVTWLLNSK YQFDQDLMMF ATVSTGFKSG GFNSVMTQGG
LTADERTIDS EEVINYEIGA RSTLFEGVMT TNATLYRTEI DNFQDRSFKG LNFITSNVGK
LRQQGLELEM NVYPTDELTL RASYAYLDSA FLDYKDATNL PGIPGPQDLT GTPNNRSPKN
QLSAFAEYAD TFSSANLGWY ARIESNWQDD SNVGSTTNNN PQDIQEAFAL TNIRLGLLGS
NEDWSVQLYA ENVTNESYCQ NTFNQPFGDQ FGTVSNGGTL IRCVMGTPRT FGLRASYHFE
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