| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2836 |
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| Symbol | |
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| ID | 5663228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3461462 |
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| End bp | 3462604 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237477 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001502690 |
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| Protein GI | 157962656 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.812231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAGTTT TAATTTTATT CATAGTTTTC TTGTTGGGCG GGTGTGTAAG CTCTGATAGG
AGTTCTGAGA GGAGCCCAGA CTTTGCCATT GAGTTGCATC GCAAAGCGGC AGAGCAAGGC
GTTGCAGACG CGCAATATAC ACTCGAGACC ATATATGATT ATGGAATTAA CGTACCAGTG
AACAGACAAG AAGCCATTAA ATGGTATCGC AAAGCGGCAG AACAAGGCGT TGCAGACGCG
CAATATACAC TCGGGACCAT ATATGATTAT GGAATGGGCA TACCGGAGAA CAGACAAGAA
GCCATTAAAT GGTATCGCAA AGCGGCAGAA CAAGGCGTTG CAGACGCGCA ATATACACTC
GGGACCATAT ATGATTATGG GATTGACGTA TCAGAGAACA GACAAGAAGC ACTGGATTGG
TATTACCTGG CCGCAGAGCA AAATCATGTC GATGCACTTT ATGCTATCGG CATGATCTTT
CATTCAACGA AGGAAGATTA TCCAGAAGCA ATCTATTGGA TTAAAAAAGC CGCAGATAAG
GGCCTTGATG AAGCACAGTA TGATTTGGCT AGAATGCTTT ATTTTGGGGT CGGAACTGAG
GAAAACAAAC AGCAAGCGTT TATTTGGTAT CTGAAAGCCG CTGAGCAAGG CCATGTTGCA
GCCCAATTTT ATGTTGGTTC TGCTTATGAT TTTGCGCAAG GAGTTGCAGA AAACAAAACA
AACGCCTTTG TTTGGTATCA GAAGGCGGCT AATGAGGGGT ATGCAAAAGC CCAGTTTCAC
TTAGGCTCAA TGTACGAACT AGGGGAAGGT ACAACAGTTA ATAAAGCCAA AGCCATAAGG
TGCTATTTGA AAGCGGCTGA ACAAGGGCTA CCCGATGCGC AGCATAACCT TGGGGTGATG
TTTGAACTGG GCGATGGAGT GGTCAAAAAC ATGCCTGAGG CAATAACATG GTACACGGCC
GCGGCCAAGC AAGGAAATGC TGAATCACAG TATGTATTGG GCACCATATA TGAATCGGAT
AAGAGTGAAC CACAGAATCT ACATATTGCA GACATGTGGT ATCAAGGAGC GGCAGCGCTG
GGACATCAGA AAGCGCTAGA AGCGTTAAAG CAAAATCGCA CGGAACCCCG CACAATGCAT
TAA
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| Protein sequence | MRVLILFIVF LLGGCVSSDR SSERSPDFAI ELHRKAAEQG VADAQYTLET IYDYGINVPV
NRQEAIKWYR KAAEQGVADA QYTLGTIYDY GMGIPENRQE AIKWYRKAAE QGVADAQYTL
GTIYDYGIDV SENRQEALDW YYLAAEQNHV DALYAIGMIF HSTKEDYPEA IYWIKKAADK
GLDEAQYDLA RMLYFGVGTE ENKQQAFIWY LKAAEQGHVA AQFYVGSAYD FAQGVAENKT
NAFVWYQKAA NEGYAKAQFH LGSMYELGEG TTVNKAKAIR CYLKAAEQGL PDAQHNLGVM
FELGDGVVKN MPEAITWYTA AAKQGNAESQ YVLGTIYESD KSEPQNLHIA DMWYQGAAAL
GHQKALEALK QNRTEPRTMH
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