| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2818 |
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| Symbol | |
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| ID | 5663210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3438237 |
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| End bp | 3440759 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237459 |
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| Product | anaerobic dimethyl sulfoxide reductase subunit A |
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| Protein accession | YP_001502672 |
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| Protein GI | 157962638 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.751469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACGTA GAAGTTTCTT AAAAATGAGT GCCGCGCTGG GCTGCGCTGC AACAGTTACC
GGCTGTAATT CAAGCTCTGA TGATGCCAAT GTTATTCCAC CACAGCCGCC AGTGACTGAC
GAAGTGGTAA ACTGGTCATC TTGCCTAGTT AACTGTGGTT CTAACTGTCC AATTAAGGTC
TTTACTAAAG ACGGTATCGT GACCCGTGTT GAAACTGACC ATGAAGTTGA AGACAACTAC
GGTCTACACC AAGTACGTGC TTGTGCTCGT GGTCGTTCAC TACGTCAAAG AAACTACGCT
GTTGACCGCC TAAAAACACC AATGAAGCGT GTTGGTGAGC GTGGTAAAGC TGAATTTGTA
CCCATTAGCT GGGACGAAGC AACCAGCATT ATCGCTGAAA AGCTTGCTGC TGTTTACGCA
CAAGAAAATG GTGCTAAGTC AGTATTCCGT AGCTACGGTT CTGGTGCTTA CTACGGTTTT
GCATCAAATG CCTGTTTCAA CCGTCTATTT AACCTAAATG GTGGTTGCCT AAATGCTTAT
GGTAACTACT CTTGGGCGCA GCAGATGGAA GCGGCTAAGC ACACCTTCGG TACTGGCAGT
ACTAGCGGTT CGTCAACCAT CACTATTGAA GACAGTGACT TCTTCTTAGG TGTTGCTTAC
AACCCAAGCG AGATCCGTCA ATCGGGTTCA GGCGAAGGTT ACGATTACCT ACAGGCATTG
CAGAAAAATA ATGGCCTAGA AGTGGTAATG ATCGACCCTC GTTACACTGA CTCCATGCTA
GGTAAAGAAT CAAGCTGGTT ACCAATCCGT CCAGGTACTG ATGCTGCGTT TGCTGAAGCG
GTTGCCTATG TGATGATCAA CCACGCTAAC TTTGTTGGTC AATCTCTACC GTTTGTACTT
GAGCATTCAG TTGGTTTCAA CAAGCAGTCA ATTGAAGATC AAAAAGCGAT TTTTGCAGCG
AGCAGCGATG CGACTGACCA AGAATACGCT AAGGTAATGA ACTCAGATGA AAACTACCAA
GACTACATTC TAGGTCAAGG TATTTACACT GACGCTAAGA CACCAGAATG GGCTGAAAAA
ATCTGTGGTA TTTCTGCAGA GAAAATCCGC TACATCGCTG GCAAGCTAAT GACAGCTAAA
GCTCCTTACA TCGTTGTGGG CGCAGGCGTT AACCGCCAAG CAAACGGCGA GCAAAGCATG
CGTTCTCTAT ACATGCTATC AGTGCTAACC GGTAAGCTAG GTACTCGCGG TGCATCAAAT
GGTGAACTAC CGTACATGAG CAGCATGTCT CGTGCAGGAA TTCCAACAGG TACAAATAAA
GTTACAGAAA GCATCTCTTT CTTCACTTGG TCTGAAGCGA TTAATAACGG CGTTAATATG
ACTGCTCGTA GTCACGGCGT TCGTGGTACT GACGGTTTAG ATACGCCACT TGGCGCAAAC
ATTAAGTTCA TTCTGTCTGC ATCAGATAGT TCGTTACTGA ACCAGCACGC TGAAATCAAC
AATACGGCTG ATATCTTCCG TAATGCTGAA GATCTATTCA TCGTATCTTG TGATTGCTGG
ATGACGCCTG GCGCTAAGTT TGCTGACATC ATCTTACCGG ATACTAGCTG GTTAGAGTCA
AACGACTTAG TTAACGACTC ATACGCTTCA GGCTCACTAG GTTACCTAAC TGCCATGTCT
TCATCTGTTG AGACTATGTG GGATTGTAAG TCTATGTACG AAGCGGCTGC GATGATCGCT
GACAAGATGG GCGTTGGCGC TGGCTTTAGA GACGGCAAAA ACGAAGATGA GTGGTTAGAA
GAGCTTTATC AAAGCACTAA AGCTAACAGC AACAACATCG GTGTTTCTCC AGCGTTCCCT
GCAACTTACA AAGAAGCACA AGAGATTGGT TTCTTCCGTA AGAACATGAA CGATAACCAC
GTTGCACTGC AAAGCTTTGT GAAAGACGGT AAAGCGCTAT CAACACCAAG TGGCAAGATT
GAAATCTATT CTGCTGAACT TGCATGGCGT GCGGCTAACT GGGACCAAGA GAACAGTACT
CAAAATCCTA CAAACGTTAA GGGCGACACC ATCACAGCTA TTCCACAGTA CACAGTAACG
TGGGACGGTT ATGAAGATGA AGGCACTAAA GAAGATTACC CAATTCAGCT AGCGGGTTAC
CACACTAAGG GCCGTACCCA CTCAAGCTAC CACAACGTTC CATGGCTGCG TGAAGCGGTA
GAAGACGCTG TTTGGGTTAA CCCAATGGAC GGTGCTAAGC ACGGCCTAAG CTCTGGCGAC
AAGATTGAGA TGTACAACGA GCGTGGTTCA ATTGAAGTGA CTGTACGTAT CACACCACGT
GTTGCGCCAG GTGTATTTGC CCTAGGACAA GGTGCTTGGT ACAACCCTGG CAACAAGCGA
GGCAGTACTG GCCATATCGT TGACGAAGGC GGCGCAATTA ACTCGTTAAC TCGCTACCAG
CCTAGCCCTG TCGCTAAAGG TAACCCACAG CACACTATTC GTGTTGCCAT TAAAAAGATT
TAA
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| Protein sequence | MERRSFLKMS AALGCAATVT GCNSSSDDAN VIPPQPPVTD EVVNWSSCLV NCGSNCPIKV
FTKDGIVTRV ETDHEVEDNY GLHQVRACAR GRSLRQRNYA VDRLKTPMKR VGERGKAEFV
PISWDEATSI IAEKLAAVYA QENGAKSVFR SYGSGAYYGF ASNACFNRLF NLNGGCLNAY
GNYSWAQQME AAKHTFGTGS TSGSSTITIE DSDFFLGVAY NPSEIRQSGS GEGYDYLQAL
QKNNGLEVVM IDPRYTDSML GKESSWLPIR PGTDAAFAEA VAYVMINHAN FVGQSLPFVL
EHSVGFNKQS IEDQKAIFAA SSDATDQEYA KVMNSDENYQ DYILGQGIYT DAKTPEWAEK
ICGISAEKIR YIAGKLMTAK APYIVVGAGV NRQANGEQSM RSLYMLSVLT GKLGTRGASN
GELPYMSSMS RAGIPTGTNK VTESISFFTW SEAINNGVNM TARSHGVRGT DGLDTPLGAN
IKFILSASDS SLLNQHAEIN NTADIFRNAE DLFIVSCDCW MTPGAKFADI ILPDTSWLES
NDLVNDSYAS GSLGYLTAMS SSVETMWDCK SMYEAAAMIA DKMGVGAGFR DGKNEDEWLE
ELYQSTKANS NNIGVSPAFP ATYKEAQEIG FFRKNMNDNH VALQSFVKDG KALSTPSGKI
EIYSAELAWR AANWDQENST QNPTNVKGDT ITAIPQYTVT WDGYEDEGTK EDYPIQLAGY
HTKGRTHSSY HNVPWLREAV EDAVWVNPMD GAKHGLSSGD KIEMYNERGS IEVTVRITPR
VAPGVFALGQ GAWYNPGNKR GSTGHIVDEG GAINSLTRYQ PSPVAKGNPQ HTIRVAIKKI
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