| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2804 |
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| Symbol | |
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| ID | 5663196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3423868 |
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| End bp | 3424524 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237445 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_001502658 |
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| Protein GI | 157962624 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.753217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCATTAT CAAGAGAACA ACTGGCACAG CGTGTAGCAC AAGAACTCCA AGATGGCTTT
TACGTCAACC TAGGCATTGG TATTCCAACA CTCGTTGCTA ACTATATCCC TCAAGGCATC
GAGGTGATGC TGCAATCGGA AAATGGTTTA CTGGGTATGG GCGAGTTCCC AACCGAAGAC
ACCATCGATG CAGACTTAAT TAACGCAGGT AAGCAAACCG TTACCGCTGT AGACGGTGCC
TCATTTTTCT CATCCGCGGA AAGCTTTGCC ATGATCCGTG GCGGCCATGT GGACTTAACC
GTACTTGGCG CATTTGAAGT CGATGAACAG GGCTCAATCG CCTCGTGGAT GATCCCTGGA
AAATTAATTA AGGGCATGGG CGGCGCTATG GATTTAGTGG CAGGCGCAGA CAATATTATT
GTCACCATGA TGCACGCCGA CAAGAAAGGC AATTCTAAAC TTTTGCCTAA GTGCGAACTG
CCATTAACCG GCTTTGGCTG TATCAAGCGG GTATTAACCG ACTTAGCCTT TCTGGAAATT
AAAGATGGCG CGTTTCATCT ATTAGAGCGT GCACCGGGTG TATCTGTTGA AGAAATTGTA
TCGAAAACAG CTGGCAAGCT AGTAGTGCCT GAACATGTTC CAGAGATGAG ATTTTAA
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| Protein sequence | MALSREQLAQ RVAQELQDGF YVNLGIGIPT LVANYIPQGI EVMLQSENGL LGMGEFPTED
TIDADLINAG KQTVTAVDGA SFFSSAESFA MIRGGHVDLT VLGAFEVDEQ GSIASWMIPG
KLIKGMGGAM DLVAGADNII VTMMHADKKG NSKLLPKCEL PLTGFGCIKR VLTDLAFLEI
KDGAFHLLER APGVSVEEIV SKTAGKLVVP EHVPEMRF
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