Gene Spea_2797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2797 
Symbol 
ID5663190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3415858 
End bp3417027 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content49% 
IMG OID641237439 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001502652 
Protein GI157962618 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAAC TCTACACATC TCTAAACTTC GGACTCGGTG AAGATGTCGA TATGTTACGC 
GATGCCGTGC AAAACTTTGC CGCCAATGAA ATTGCGCCTA TCGCCGCAAA AACAGATCTA
GATAACGCCT TCCCTAATGA GCTTTGGCCT GTGCTGGGTG ATATGGGATT ACTCGGTGTC
ACCGTCTCTG AGGAGTATGG TGGGGCTGGC ATGGGCTATC TCGCCCACGT TGTTGCTATG
GAAGAGATCT CCCGCGCCTC TGCATCGATT GGCCTAAGTT ACGGTGCGCA CTCCAACCTC
TGCGTTAACC AAATCAACCG TAACGGTAAT AGTGAGCAAA AAGCCAAATA CTTGCCAAAA
CTCATCACGG GTGAGCACAT TGGAGCCCTC GCTATGAGCG AGCCCAATGC AGGTTCTGAT
GTGGTATCGA TGAAACTCCA CGCCCGTAAA GAGGGTGACA GATACATACT CAACGGCAAC
AAGATGTGGA TCACCAATGG CCCAGACGCG CACACCTATG TGATCTATGC CAAGACAGAT
CTCGATAAGG GTGCCCACGG CATTACCGCA TTTATCGTTG AGCGCGGCTA TAAGGGTTTC
AGTACCGCTC AGAAGCTAGA CAAACTCGGT ATGCGCGGCT CAAACACCTG TGAGTTGGTA
TTTGAAGATT GCGAAGTACC AGAAGAGAAC ATTCTTGGCG GGCTTAACAA CGGCGTAAAA
GTGTTGATGA GTGGTCTTGA TTACGAGCGC GTAGTCTTGT CAGGTGGTCC ACTTGGGATC
ATGACCGCCT GCATGGATAT TGTGGTGCCA TATATCCATG AGCGTGAACA GTTTGGTAAA
TCAATCGGCG AATTCCAGCT TGTACAAGGC AAACTTGCTG ATATGTACAC AGGCATGAAC
GCGGCTAAAT CTTATATCTA CAACGTGGCA AAATCTTGTG ACCGTGGCGA GACTACTCGT
AAAGATGCCG CTGGCGCGAT TCTCTATTCT GCTGAACTGG CAACCAAGAT GGCGCTCGAT
GCGATTCAGT TACTTGGCGG TAATGGCTAC GTCAATGAAT ACGCAACGGG TCGCTTACTT
CGTGATGCCA AGCTTTATGA AATCGGCGCT GGCACCTCAG AAATTCGCCG CATGCTGATT
GGTCGCGAGT TATTTACCGA ATCTAAGTAA
 
Protein sequence
MTQLYTSLNF GLGEDVDMLR DAVQNFAANE IAPIAAKTDL DNAFPNELWP VLGDMGLLGV 
TVSEEYGGAG MGYLAHVVAM EEISRASASI GLSYGAHSNL CVNQINRNGN SEQKAKYLPK
LITGEHIGAL AMSEPNAGSD VVSMKLHARK EGDRYILNGN KMWITNGPDA HTYVIYAKTD
LDKGAHGITA FIVERGYKGF STAQKLDKLG MRGSNTCELV FEDCEVPEEN ILGGLNNGVK
VLMSGLDYER VVLSGGPLGI MTACMDIVVP YIHEREQFGK SIGEFQLVQG KLADMYTGMN
AAKSYIYNVA KSCDRGETTR KDAAGAILYS AELATKMALD AIQLLGGNGY VNEYATGRLL
RDAKLYEIGA GTSEIRRMLI GRELFTESK