Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2791 |
Symbol | |
ID | 5663184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3407670 |
End bp | 3408536 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641237433 |
Product | acyl-CoA thioesterase II |
Protein accession | YP_001502646 |
Protein GI | 157962612 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1946] Acyl-CoA thioesterase |
TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000176702 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAAG TATTAGATGA TCTTCTAGCG TTACTTTCTT TAGAACAGAT CGAAGAGGGG CTGTTTCGTG GCCAAAGCCA AGATCTTGGT TTTGGGCATG TCTTTGGCGG TCAAGTCATG GGGCAAGCGC TTAGCGCGGC TAAGCGTACT GTGAGTCCTG ATCGCAAAGT GCACTCTTTA CACTCCTATT TTTTACGTGC GGGTGATGAG AAGCTACCCA TCGTTTATGA TGTTGAAATC ATGCGAGATG GCGGCAGTTT TAGTGCGAGA AGAGTCAAAG CTATCCAGAA AGGTCGTCCT ATATTCTATA TGACCTGCTC TTTTCAAACG AGCGAGGAAG GTTATGAGCA TCAAGCGACT ATGCCTGATG TGCCGGGGCC TGAAGGTCTG CTTAACCAAC AAGAACTGGC GATGACACTG AGAGACAAGG TGCCGTCTAA AGTGCTTGAG AAGTTTATGG CTGACACGCC GATTGAGATG CGTCTAGTCA ATCCAAGTGA TCCCATCGCA CCTAAAGCCT GCGAGCCTAT TCGTTATGTA TGGATCCGGG CCAATGGCAA GTTGCCAGAT AATTTCTCTG TGCACGACTA TTTGCTCGCC TATGCGTCAG ACTTTAACTT TCTGGTGACG GCTGCGCAGC CTCATGGGGT GTCATTTTTG ACCCCAGGTA TGCGAATGGC GACGATCGAT CACGCTATGT GGTTCCACCG TCCGTTCGAT TTCAGTCAGT GGCTTTTGTA TAGCATCGAT AGCCCTAATG CCTGTGGTGG TAGAGGTTTT GTAAGAGGGC AATTCTTTAA TCAACAAGGT GAGCTGGTGG CGTCTGCAAC CCAGGAAGGC CTCATCCGTA TGACAAAGAA AGCATAG
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Protein sequence | MSQVLDDLLA LLSLEQIEEG LFRGQSQDLG FGHVFGGQVM GQALSAAKRT VSPDRKVHSL HSYFLRAGDE KLPIVYDVEI MRDGGSFSAR RVKAIQKGRP IFYMTCSFQT SEEGYEHQAT MPDVPGPEGL LNQQELAMTL RDKVPSKVLE KFMADTPIEM RLVNPSDPIA PKACEPIRYV WIRANGKLPD NFSVHDYLLA YASDFNFLVT AAQPHGVSFL TPGMRMATID HAMWFHRPFD FSQWLLYSID SPNACGGRGF VRGQFFNQQG ELVASATQEG LIRMTKKA
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