Gene Spea_2789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2789 
Symbol 
ID5663182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3406556 
End bp3407149 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content43% 
IMG OID641237431 
Producthypothetical protein 
Protein accessionYP_001502644 
Protein GI157962610 
COG category[S] Function unknown 
COG ID[COG3575] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0745609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACATTA AAATAGACGT TGAAAAGCAA ATTAAGCTCT GGTTACTCGA AGATGATTAT 
CGACTCAATG CCCTGCGTAT CGCCGAGCAA ATTAAGCTCA ATGATTGGAT GCTGGCGGCG
GGTTTTGTCC GAAACTTAGT TTGGGATAAA CTGCACAATA TTCAAACTGA ACTTAATGAT
ATCGATTTCA TCTATTTTGA TCAGAGTGAC TTATCCTCGG GCAGAGATGG CGAAATTGAA
GCCGAGCTCA ATCGAATAGC GCCTATGTAC CCATGGTCTG TTAAGAATCA AGCGAGAATG
CATCTGCGTA ACCAGCATCA ACAGTATGCA TCAAGCATAG ATGCCATGAG TTATTGGCCC
GAAAAGCAAA CCGCTGTTGG GGTGAGCTGT CAGCTAACAC TTTCACCTGC ATCAGCATCT
GATCATTCAT TAGAGTCCGC GGAATTGGCC TTACATAGTC CGTTTGATTT AGCATGCCTG
TTTGATTTTT CATTGCAAGC TAACCCCAAA TCAAAGCGTG CGTTGTTTGA ACAGAGGCTG
ACACAAAAGG GATGGTTGCA AACTTACCCT AAGCTGCGAG ATAATGCTAA GTGA
 
Protein sequence
MNIKIDVEKQ IKLWLLEDDY RLNALRIAEQ IKLNDWMLAA GFVRNLVWDK LHNIQTELND 
IDFIYFDQSD LSSGRDGEIE AELNRIAPMY PWSVKNQARM HLRNQHQQYA SSIDAMSYWP
EKQTAVGVSC QLTLSPASAS DHSLESAELA LHSPFDLACL FDFSLQANPK SKRALFEQRL
TQKGWLQTYP KLRDNAK