Gene Spea_2779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2779 
Symbol 
ID5663172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3395395 
End bp3396573 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content50% 
IMG OID641237421 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001502634 
Protein GI157962600 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.701645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGT TGAATATGCA AGCAAACAGC GACCAAGTGC TGTTTAGTAC GCTAACCACC 
GACTCTGGTA AGCAAGTTGG CGTTGCGACA CTGAATATTG AAAAAGCGCT CAATGCCCTA
AACCTAAACA TGGTGCAGGC GTTGACCGCT CAGCTGACTG CATGGCGCAG TGATGACAAT
ATTGTTGCAG TGGTACTCGA CGGAGCCGGT GAAAAAGCCT TTTGCGCCGG TGGCGATGTA
CGCGCCATTT ATCAAGCTTC GGTAAAAACG CCAGGTGAAG TCACTGATGC GGCAACCCAG
TTCTTTAAAC AAGAGTATGA GCTCGATTAT CTACTGCACA CCTTTGGTAA ACCTGTCGCC
GTTTGGGGAG ATGGCATAGT CATGGGCGGC GGCCTAGGCC TGATGATAGG CGCAAGTCAC
CGTATCGTCA CCGAGCGCTC GCGTATCGCC ATGCCTGAGG TCACTATCGG TTTATACCCC
GATGTTGGCG GCAGTTATTT CTTAAATCGG ATGCCGGGAA AATCCGGGCT ATTTTTAGGA
ATGACGGCTT ATAACATGAG CGGCGCAGAT GCCCATTATG TTGGCATAGG TAATCATTAT
CTGAACTTTG ATGACAGAGC GGCATTCTTT GATGCCTTAA CTGGCGTGAG TTGGAGTGCT
AGCCAAAATG AGAATCATCA AGCCCTGCAT AGCTTGCTCG ATAAGATGCA AGAAAAATGC
AGCACGCCAC TCGGCGCGAG CCAGCTTGAG CAAAACCGTG AGCTTATCGA TGAGCTAATG
ACGGGCTCAT TAGATGAGAT CGTTGTTCGT GTTAGGGCTC GTATCAGTAC ACGTGTCACA
GATCAGGATG AGCAAACGGC AATCGCGCAC CCTTGGTTAG TCAAAGCGAT TAAGACCATG
TTAGCGGGCA GTCCAATCAG CCTGAAACTT GTGCATTTGC AATCACAACT GAGTAAGGAT
TTGAGCCTAG CCGATTGTTT TAAGCTTGAA CTTGGACTAA GTGTTAATTG CTGTGCCAAG
GCAGATTTTG CCGAAGGTGT GAGGGCGCTG CTTATCGATA AAGATCGCAA TCCGCAGTGG
CGCTTTGCCG ATGTGGCGGC GATCCCCCAG GGCTACGCAG AAGGTTTACT GCGATCCCCA
TGGGACGATG CCAGTCATCC GCTAAAAGGT TTGCACTAA
 
Protein sequence
MSELNMQANS DQVLFSTLTT DSGKQVGVAT LNIEKALNAL NLNMVQALTA QLTAWRSDDN 
IVAVVLDGAG EKAFCAGGDV RAIYQASVKT PGEVTDAATQ FFKQEYELDY LLHTFGKPVA
VWGDGIVMGG GLGLMIGASH RIVTERSRIA MPEVTIGLYP DVGGSYFLNR MPGKSGLFLG
MTAYNMSGAD AHYVGIGNHY LNFDDRAAFF DALTGVSWSA SQNENHQALH SLLDKMQEKC
STPLGASQLE QNRELIDELM TGSLDEIVVR VRARISTRVT DQDEQTAIAH PWLVKAIKTM
LAGSPISLKL VHLQSQLSKD LSLADCFKLE LGLSVNCCAK ADFAEGVRAL LIDKDRNPQW
RFADVAAIPQ GYAEGLLRSP WDDASHPLKG LH