Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2757 |
Symbol | |
ID | 5663150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3370138 |
End bp | 3370902 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641237399 |
Product | ribonuclease H |
Protein accession | YP_001502612 |
Protein GI | 157962578 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.107855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAAAA AGTATTACGT GGTATGGGCT GGTCGTGAGA CCGGCATTTT TACGAGCTGG GATTACACCA AAAAGCAGGT CGACAAATTT CCTCAGGCCA AATATAAGTC TTTCCCAACC GAAGCTGAAG CCAAGGCTGC CTTTGCTAAG TCGCCGAGTT ACGGCAGCGC GACAAGAAAA CCTACATCAG GGCCAGCCAA AGCCAAAACA GCCGCTAAAG CCAGCCTAGA TATCGATGTT AGTCGCTGTG ATGTATCTAT TTTTACCGAT GGCGGCTGTG AGCCTAACCC AGGTAAAGCA GGCTCTGGAG TGGCGGTTTA TCATAATGCC GTGCTTTCAG AACTTTATTA CGGCCTTTAT AACGCTAACG GCACCAATAA CTCAGCCGAG CTAAACGCCT TACACCAGGC GCTATTGATT GCCGATAAGG CACTAAAACA AGGGCAAAGC GTACAGATCT TAAGTGACTC ACAGTACTCA ATCAACTGCA TTACTAATTG GGCTTACGGC TGGAAAACCA AAGGCTGGAA GCGCAAGGTT GCTGGTGATA TCAAAAACTT AGATATTATT CAGCAGTCTC ATGCCTTGTA TGATTCTCTA AAGGATAAAC TTAACATTCA ACACGTTGCC GCTCACGTTG GTATAGAAGG TAACGAATTG GCCGACCGCA TGTCGATTTA TGCTATCGAC CAAAAAGACC CGGCGTTTTG TCGTTATCCA GACCCTATTG TACTGACTGA TATTCTTAGC CTACGTGCCG GTTAG
|
Protein sequence | MAKKYYVVWA GRETGIFTSW DYTKKQVDKF PQAKYKSFPT EAEAKAAFAK SPSYGSATRK PTSGPAKAKT AAKASLDIDV SRCDVSIFTD GGCEPNPGKA GSGVAVYHNA VLSELYYGLY NANGTNNSAE LNALHQALLI ADKALKQGQS VQILSDSQYS INCITNWAYG WKTKGWKRKV AGDIKNLDII QQSHALYDSL KDKLNIQHVA AHVGIEGNEL ADRMSIYAID QKDPAFCRYP DPIVLTDILS LRAG
|
| |