| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2736 |
|---|
| Symbol | |
|---|
| ID | 5663129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 3343143 |
|---|
| End bp | 3344192 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641237378 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
|---|
| Protein accession | YP_001502591 |
|---|
| Protein GI | 157962557 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.24318 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATT CCCGCGTTTT TATTAATAGT ATGGCCTACG AGTTAGCGCC TGAAGTTGTG
TCGACTTCGG AGCTAGAATC TCGGTTAGCG CCTTTATACC AAAAGTTTCG TATTCCGATG
GGGCAGCTTG CAGCCTTAAC TGGGATCCAT GAAAGACGCT GGTGGCCTAA AGGGCATCGC
TTATCTGATG GCGCTTTAGC CGCAGCCCAT AAGGCTATCG ATGAAACCGG CGTACAGATC
AGCGATCTTG GCGCCGTTGT CTATACCGGA GTGTGTCGTG ATCAACACGA GCCCGCGACG
GCGTGTCGTA TTGCAGCCAA GCTTGGCGTG TCAAAAGACA CTGCGATTTA TGATATCAGC
AACGCTTGTC TTGGTGTGCT TTCAGGCATT TTAGATATCG CGAATCGTAT CGAGCTTGGT
CAAATTAAAG CTGGCCTAGT GGTTTCTTGT GAGTCGGCTC GCCATATCGT CGACATCACA
ATCGATAAGA TGCTGGCTGA GCCAACGATG CAAAATTACG CCCAGTCTCT GGCTACCTTA
ACTGGTGGCT CAGGCGCTGT AGCCGTGTTG CTTACCGATG GCAGTTTAGA TCTCAAGGGT
AACCGTCATC ATCAACTTCT TGGGGCTAGT CACTTGTCAG CACCTGAGCA CTACGACTTG
TGTCAGTGGG GCTTAGAGGA GGCGGGGCCG CAGCTTTATC GCGAGTTTAT GCGCACTAAT
GGTGTGGCAT TACTTAAAGA AGGCGTTGAG CTTGCTCGTC ATACTTGGAG TCACTTCCTT
GAGCAGCGTA ATTGGCTGGT TGAACAAGTC GATAAGGTGA TCTGTCATCA GGTTGGCGCT
TCAAACCGTC GTAATGTCTT GAGTGCGCTA AATATCCCTG AAGAGAAAGA ATTCCCAACC
TATAAGCTAC TCGGCAACAT GGGCACGGTA TCTTTGCCTG TTACCGCTGC AATGGCTCAC
GATCAAGGTT TCTTGAAGAG TGGCGACCAA GTGAGCTTCT TAGGCATAGG CAGTGGTTTA
AACTGCATGA TGTTAGGCCT TAAGTGGTAA
|
|---|
| Protein sequence | MKYSRVFINS MAYELAPEVV STSELESRLA PLYQKFRIPM GQLAALTGIH ERRWWPKGHR
LSDGALAAAH KAIDETGVQI SDLGAVVYTG VCRDQHEPAT ACRIAAKLGV SKDTAIYDIS
NACLGVLSGI LDIANRIELG QIKAGLVVSC ESARHIVDIT IDKMLAEPTM QNYAQSLATL
TGGSGAVAVL LTDGSLDLKG NRHHQLLGAS HLSAPEHYDL CQWGLEEAGP QLYREFMRTN
GVALLKEGVE LARHTWSHFL EQRNWLVEQV DKVICHQVGA SNRRNVLSAL NIPEEKEFPT
YKLLGNMGTV SLPVTAAMAH DQGFLKSGDQ VSFLGIGSGL NCMMLGLKW
|
|---|
| |