| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2724 |
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| Symbol | |
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| ID | 5663117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3330191 |
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| End bp | 3331750 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641237366 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001502579 |
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| Protein GI | 157962545 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTACT ATTACAAGTC CCTCATCGCC TTTTCAATTA CCTCAATTGT ATTTTCAGCT
AACGCCAATA CTGAGAGTTC GTTCGCCGAA TTAGAGCAGG CTAAAACCCG TATTAACCAA
CCATTTGAAG AGAAAGTTGC TGATTTTCAT CAATACGTTA ACCAGTATTT GGATGAGTAT
GAGGCATGGA GATCCCAGTA TAATGAAGCT CTCGACAAAC AGCGAACCGA GCTCATAGGT
CAATGGGGAA GTGGTGAAGT CTCTGACCAA ACAAAAAGTG TCGAATACAC TGACAATAAC
ACCGTTAAAA AGGTCATCGA CTATGAAAAT AACACCGCTA CCATATCGGT ATTACTTGAT
GCTGATGCTG TTACAGAGTC CACACGTACT ATTGTACAAC AGGGGCTGAC CGTCGATGGT
CAGGTTTTAA ACCTCACGCA GGCCAGCATA TCGCTTGTGC AAGTCAATTA TTCACTGCAG
CAGGAGAAAC AAGAAAAGTC GTTTATTATT AAACAAATAG AGCTGCAAAT GAAGGAGCTG
GATATTCAAG CAGACAGATT GATTCAGTCT GAAACAGGTA TTCCAGAATC ATTTATTTTT
GAAAGAGCCC ATAAGCAAAA ACAGATCTTG CTTGCCGAGG GCAAAGTCCG CCTTAAGCAT
ATAACTGATC TATATGACAG CAAACGAGAA GAACTAGGAA TTGAAACTGT TGCATTAATG
CCCATGGTTT CTGACAGTAA ACCAACAACT GCACTGCAGA CCGAACAAAC ACAAGTATCC
GATAAGCAAA CAACCAAACA AGCAGAGTTG CGGAATAACG CCACAGACAA GCCAACGGTA
ACACTCGCAA CCGAACAAGC ACCAGTTGTC AATAAGCAAA CAACCTCACA GGTAGAGCGA
CATGATAAAG CTTCTTTCAA AGAAGCTCAG GCCTTCGCTG AAATTGTGGT CCCAGCCGCA
GTGATTAAGC CTGCAGCCCA GAAAAAAATC GTTTCTTACA CAGTAAAACT ACCTAATAAG
AGCCTAAATC TGCGCGCCAA CCAGTATCAC CCTTTGGCCA CTGCAGAAAG CAAGAAGTGG
GGAATTGATG AGGCTGTAAT TATGGCAATT ATGCACAGTG AATCGAGTTT CAGGCCGGAT
GCTAAATCTC ATGTGCCAGC CTTTGGCTTG ATGCAGGTCG TTCCTGTAAG CGCAGGTCAT
GATGTTAACA AGCACATTCG CAACATCGAT GCACCAATGA AGGCAGAAGA GTTATATGTA
CCACCATTAA ATGTTGAAAC TGGTGTCGCT TACCTCCATA TATTAAACGA CAAGTACCTC
AAAGCTATTA TTGATCCCCA AAGCCGCCTT TATTGCATGA TTGCCGCCTA CAATACTGGG
GCAGGCAATG TAGCTAGAGC CTTCAACGAA AACCGTACGA CTAACATCCG CAAGGCCGCA
GAAGTGATTA ACAAGATGCC ACCGGATCAG GTTTATCAGC ACCTGCTAAA ACAATTACCG
TACGATGAAA CCAAAAATTA CCTCAAAAAG GTGAATCAGC GAATCGCGCT TTACCAATAA
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| Protein sequence | MNYYYKSLIA FSITSIVFSA NANTESSFAE LEQAKTRINQ PFEEKVADFH QYVNQYLDEY
EAWRSQYNEA LDKQRTELIG QWGSGEVSDQ TKSVEYTDNN TVKKVIDYEN NTATISVLLD
ADAVTESTRT IVQQGLTVDG QVLNLTQASI SLVQVNYSLQ QEKQEKSFII KQIELQMKEL
DIQADRLIQS ETGIPESFIF ERAHKQKQIL LAEGKVRLKH ITDLYDSKRE ELGIETVALM
PMVSDSKPTT ALQTEQTQVS DKQTTKQAEL RNNATDKPTV TLATEQAPVV NKQTTSQVER
HDKASFKEAQ AFAEIVVPAA VIKPAAQKKI VSYTVKLPNK SLNLRANQYH PLATAESKKW
GIDEAVIMAI MHSESSFRPD AKSHVPAFGL MQVVPVSAGH DVNKHIRNID APMKAEELYV
PPLNVETGVA YLHILNDKYL KAIIDPQSRL YCMIAAYNTG AGNVARAFNE NRTTNIRKAA
EVINKMPPDQ VYQHLLKQLP YDETKNYLKK VNQRIALYQ
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