| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2708 |
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| Symbol | |
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| ID | 5663101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3306603 |
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| End bp | 3309536 |
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| Gene Length | 2934 bp |
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| Protein Length | 977 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237350 |
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| Product | hypothetical protein |
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| Protein accession | YP_001502563 |
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| Protein GI | 157962529 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATACA ACAAACTAGC CCTTTCAATC CTATTTGGTC TGTCTTGTAC CCTTAACCCT
CAGCTGTCTT TACCTAGCTA TGCATCGGTA AAAACGGAAG GCATTGCGAT ACCAGATGAG
TTTGCAGAGC TGTATTCAGG CAGTACTGAG CAGTTTAGCT TTCAGTTGGC CAGTAGCAAT
GATCAGCTTG TTATCAAGCT TAACTCTACG CCTACCTCAG CATCTTTAAA TAGGGCGAGT
AAGGCCAAGG TTGAGCAATA CTTAACGGCG CATAATGTTA AGCCTCAAGC TGCTAGCGAC
ATTGTCGCGG CGATGCAACA CATTAGCACA TCAAGCTTGT GCCAGGGGAA AGTGTCTGAG
TGCAGCTTGA TGCCAGAGCG TTACGCCTTT ACCTATGATT TTGAGCATAA GAAACTCAGC
CTATTTATTA ATGCGGATCT GATTGATAAC CGCAACACCA GTCGTCGTTT TCATGATGCA
ACTAACGAGC AGTATGGTGT CATCAACAGT GTTAATTTGA ACTATCACTA TTTTAGTGAT
GGTGGCTCAT CGGTTATCGG CCGTGATGAG ACCTTAATTG GTTTAAAGTA TGGCTCGATT
AAATCAAGCC TCTATGCCGA TTCTGCTGCG AATAAGTTTG ATGCAGAGCA GCTATCTTAC
GACTATGAAG CGCAAAACAG ACGCGTTCAA TTCGGCCACT TCAAATACGG TTATGAGCAG
AATACGACGG CGTTTATGGA CTTATCGGGA AGCTATTCAC AAGACATAGT CAACTATTCT
TCTTCGCAGA ACTTGATTGA GGGGGGCAAG CAAAATAATC GTCGCCTGTT CTATATCTTG
CCGAACAAGG GGCGCATCGA GGTCTACCGC GATAGTCATT TGATCTACAG CAAGAATGTG
GACTCAGGCC AGCAGAGCAT CGCCTTTCGC GATCTGCCCT ATGGCTCTTA TACGGCAACT
GTGGTGGTGA TTGCTGCGGG GCGTGAGATC TTAAAAGAGC GTCAGCAGAT TGTTAATAAC
AGTGCTTTTT CACTCAATAA AGGTGAATAC GACTATAGCT TCTCTGCTGG TCGCTTTAAC
GACCGCTATG AAGACAGTTA TGAAGGCGTT GTAGAGCAAA ATAGGCAGCG GCAGCTCATT
AAGCTGCAAG CTAAGTTAGG TTACCGAGTT AACTCTGATA GCTTGCAAGC TGATGCGGTA
AATTTATCAG CGCAAGCTAT CGCGTTAGAT GCTTATCTAG AAGCGTTGCC TGAACAGTCC
AAACTGCAAC TCGATAGCAA TAACTTTGTC GAGGGTAAGT TTTCTTATCA GCTAACCGAT
AGCACCATGG TTGGCGCAAG GCTGCTGTCT AACTCTGATA GCACTTTGTC TGAATTAGGC
ATTAAGACCT CGTTTAATGA TGCGTCGACC GCACAGTTCA AATATGCATC TTTCTCAAAC
GGTAGTCAGT TTATGGCTGC CGATGTGAGT TTTTACAGCA TAGGGGTGGG CTACGAGAAG
TTCGATTCAG CCGACAGTGA CTTTGGTTTA GATAACTTTA TGCTGTCAAA TACCGGTTAT
CAGCGTCTTA ATGTCAATCT TTCCTCGGAT CTTTGGGGCG GTCAAGGCTA CCTGCTGTAT
GTGAACAACA AGCTAGATGC GACCAATTCG CCAGCATTAT TCGTCGACCA AAGTGATTAT
TGGTCTGTGA GTGCCGGGTT TTCCCACTCG TTTATAGCGG ACTCTGTCAT TAACTTTTCT
GCGACATTTC AAGGCGGTGA CAGTTTTGGT GTTGAAGATG ATTGGTATGC GGGCGTGCTT
TGGTCGGTCC CTCTATCGGC TGGCTGGAGT GCGAGCTCGT CGGTATCGGT GAGTCGACAA
GGGCTCGATG AGTTTAGAAA CAGCGTGGCA AATGACAGAC AGGTGACTCG CAACTTATCA
ATGAATAATG AGCTTGGGAT CAGCTATAAC GGCACCGATG TTGACCGTAA TATGAGCAGC
GACCTGTCCA GTAATATTAG TTATGACAAC AGCTACGTGG CGTCAGATAC CTATGCATAT
ATTAGCTCAG ACGGCACTCA TTCTGTCAGT TCAAGCTTTA ATAGCACTCA GGTGTTATCG
GCTAAAGGCG AAGCTTACTT CACCTCAGAG CAGAGTGACT CCTACATCAT CGTCGACGCC
CAAAATCAGG GGGGAGATGA CGCTCACCGT GGTTTGCTTT CTATCTATGA TGATAACACG
CTGAGTTATA GCGAGAATAT TGACCGAGAA GAGACGATCA TTGCGGTCGA TAAATACAAG
GCATTTAATG CGCGCTTAGA CACTGACTCA TCAAATTATA TTAGCGATCA AACACGGGAT
ATTTCCGGTT ATAGCCTACC CGGGACTGTG ATGGCTCTCG ATATTGACTT GGTGAAAGTC
AAAACCTTTA TCTCGTCATT TGACGACGTT AATCATCGAG TGATTGCAAA CGTTCAGTGC
ACTGGCGAGG GCTGTATCGA CGTTGAGCAG GTCGAGGAGG GGGTATTTAA AATTTCCGTT
ATTGCTGGCT CTGATTATCA ATTGGTATCA GATAATCAAA CTTGTGTGAC CCCGAGCTTG
GATAGGGATT CGACCTATAT CGTCAATACC GGTAATAACT ATTGCCTGCC GGGATTAGAT
AACGACGAAA CATTGATGCT GGCACAAGAT AACGCCTTGC AGCCTATCAA GATAGATGGC
GAGCAATATT ACTTTATTGG CATGTTCACC AATGAGGAAG AACGACTTAA TACCGGCCTT
AAACTGCAGC AGGCAGGCTT GTCGGTGATT ACTCGCAGCG TGGGTTCGCG CCAATATGTC
TATGTCGTTA ATGGGTCAAG CCTTAGCGCA ATGCAAGTAT CGCTGCTAAA CGAATTAAGC
CTTTATGCGA AGAGTCTCAT TAAAGATGAC AGCTTTGCTA ACAACTGGAA CTAA
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| Protein sequence | MRYNKLALSI LFGLSCTLNP QLSLPSYASV KTEGIAIPDE FAELYSGSTE QFSFQLASSN
DQLVIKLNST PTSASLNRAS KAKVEQYLTA HNVKPQAASD IVAAMQHIST SSLCQGKVSE
CSLMPERYAF TYDFEHKKLS LFINADLIDN RNTSRRFHDA TNEQYGVINS VNLNYHYFSD
GGSSVIGRDE TLIGLKYGSI KSSLYADSAA NKFDAEQLSY DYEAQNRRVQ FGHFKYGYEQ
NTTAFMDLSG SYSQDIVNYS SSQNLIEGGK QNNRRLFYIL PNKGRIEVYR DSHLIYSKNV
DSGQQSIAFR DLPYGSYTAT VVVIAAGREI LKERQQIVNN SAFSLNKGEY DYSFSAGRFN
DRYEDSYEGV VEQNRQRQLI KLQAKLGYRV NSDSLQADAV NLSAQAIALD AYLEALPEQS
KLQLDSNNFV EGKFSYQLTD STMVGARLLS NSDSTLSELG IKTSFNDAST AQFKYASFSN
GSQFMAADVS FYSIGVGYEK FDSADSDFGL DNFMLSNTGY QRLNVNLSSD LWGGQGYLLY
VNNKLDATNS PALFVDQSDY WSVSAGFSHS FIADSVINFS ATFQGGDSFG VEDDWYAGVL
WSVPLSAGWS ASSSVSVSRQ GLDEFRNSVA NDRQVTRNLS MNNELGISYN GTDVDRNMSS
DLSSNISYDN SYVASDTYAY ISSDGTHSVS SSFNSTQVLS AKGEAYFTSE QSDSYIIVDA
QNQGGDDAHR GLLSIYDDNT LSYSENIDRE ETIIAVDKYK AFNARLDTDS SNYISDQTRD
ISGYSLPGTV MALDIDLVKV KTFISSFDDV NHRVIANVQC TGEGCIDVEQ VEEGVFKISV
IAGSDYQLVS DNQTCVTPSL DRDSTYIVNT GNNYCLPGLD NDETLMLAQD NALQPIKIDG
EQYYFIGMFT NEEERLNTGL KLQQAGLSVI TRSVGSRQYV YVVNGSSLSA MQVSLLNELS
LYAKSLIKDD SFANNWN
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