Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2703 |
Symbol | |
ID | 5663096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3302028 |
End bp | 3303179 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641237345 |
Product | transcriptional regulator, CdaR |
Protein accession | YP_001502558 |
Protein GI | 157962524 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3835] Sugar diacid utilization regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.601624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTATTTTC TAGATGGCTC CTTGGCACGA CAAATCGTTA ATCGCACCAT GAAGATTATT GGTCATAATA TCAATGTGAT GAATAATCAT GGCGTCATTT TAGGCTCGGG AGAGTCTCAC CGGATCGGCG CCATACACGA AGGTGCACTG CTGGCTATCA GTCAAAAACG CACCGTAGAG ATTAGCACTC ACAGCACTGG CACACTGCAA GGTGTTAAAC CGGGAATTAA CCTGCCACTA CATTATAAAG GCAAGGTTAT CGGCGTTATC GGCATCACTG GCGAGCCTGA AAAGCTTCGT AGTTATGGTG AGCTACTGAA GATGACCGCT GAAATCATCG TTGAGCAGGC TAACACGCTT GAACAAGCTC AGTGGCAGTA CCGCCAAAAG GAAGAGTTGA TCATCGAGTT AATTAAGTCT GAGGGCGCTT TTACTTCCCA CCAGCGTAAT TGGGCTTCTC AGCTTAATAT CGATCTCGAT GCACCGCGCG TTGTGGCTAT AATTCAAGTT CAGGCCGACG AGGAAGAAAC CACGGCTAAC TCTATGTTGA AGCAGGTTAT GCATCTATTA GAAAATCCAT CGCGGGGCAA CTTAGTCGCC ATGGCCTCGA TGACGGAGTT AGTTATTTTA AAACCTGCCT TTCTCGATGG AAAGACTTGG GATCCTAACC TTGAGAGTGA GCGTATCGAT CAACTACTCA TACGGCTTCC CAAAGAACTT AATAGCCGCT TAAAAATCTC ATTAGGCCAT TTTTTTTCAA ACCCAGAAGA GATCAACCGC TCCTACCAAA CCGCACTAGA AACCTTAGCT ATCGGCCAGC AGCTCCACCC TGAGCAAAGT AAATACCTCT ACGAGGATTA CTCTCTACAG GTATTGCTGT CGGCGTTAAA AGATAGCTGG CGCGGTAAAG AGCTACTCTG CCCTTACCAA GCCCTCCTTA GCGCCGATAA AAATGGCCAG CTAGTGAAAA CCCTGACTGC TTACCTGCAA CACTTTGGTG ACCTGCAGCA ATGTGCTAAT GTACTTTTTA TTCATCGAAA TACCTTGCGC TATCGACTCG ATAAAATCCA ACAGATCACT GGCGCCAATA TCAATCAACT CGATGGGTTA TTGCAGCTCT ATATAGGCCA AGTGATGCTT AAGCAAACTT AA
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Protein sequence | MYFLDGSLAR QIVNRTMKII GHNINVMNNH GVILGSGESH RIGAIHEGAL LAISQKRTVE ISTHSTGTLQ GVKPGINLPL HYKGKVIGVI GITGEPEKLR SYGELLKMTA EIIVEQANTL EQAQWQYRQK EELIIELIKS EGAFTSHQRN WASQLNIDLD APRVVAIIQV QADEEETTAN SMLKQVMHLL ENPSRGNLVA MASMTELVIL KPAFLDGKTW DPNLESERID QLLIRLPKEL NSRLKISLGH FFSNPEEINR SYQTALETLA IGQQLHPEQS KYLYEDYSLQ VLLSALKDSW RGKELLCPYQ ALLSADKNGQ LVKTLTAYLQ HFGDLQQCAN VLFIHRNTLR YRLDKIQQIT GANINQLDGL LQLYIGQVML KQT
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