Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2698 |
Symbol | |
ID | 5663091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3294567 |
End bp | 3296582 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641237340 |
Product | decaheme cytochrome c |
Protein accession | YP_001502553 |
Protein GI | 157962519 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0681671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAATA CGAATAAATC TAAAATTGCG CTGCTTCTAG CAGCTGGTGC TGTCTCTATG GCCCTTACAG GCTGTGGTGG CGACGATGGT AACGACGGTA ATTCTGGCAA CCCTGGTGGC CCGGCTGCTG ATTACATCAA CACGCTTAAC CTAAAAGTGA CTGACGTTAC TTATACCGAT GGCGTTCCAA CAATCAATGT GTTTGCGACA AACGAAGAAG ACCTGCCTGT AGTTGGTCTA ACTGCGCTTG AAGTGAAAAA AGTTGTACAG CTTATCCCAC AAGGCGCTAC GGGTGCGGGT AACAGTGCAG AATGGCAAGC CACTTATAGC TCACCTCGTA ATGATGCTGA GAAGCTAAAG CCTGTAGATC TAAAGAATGG TAACTACAGC TTCACTATTC CAGTTGAAGG TTATAACTCT GAGCTAACTC AACGTTATAA CGTCATCGCC AGCGCTTCAA CACTCGCCGA TGGCGAAACA AGTGTGCCAC GCACTGAGCT GTCACAAGAC TTCTCAGGTG AAGGCTATGA AGCAACATAC ACTAAAGATG TCGTAGCGAC AGCAAGCTGT ACCTCATGTC ATGCTGAAGG CAAGAAGATT TACCACGGTT ATACCTCTTC TGAAACTTGT GCTGCTTGTC ATACACAAGA AATGGCCGAT GAAAAAGGTA AGCCACACGT AGCTTATAAC TTCCTTATTC ACAATGTTCA TAACAACATT GAAGAAGCAC ACCTACCTGA TGATGAAAAG CAAAACGAAT CTGCAGAAAA GGCATATGCT TTAATTCAAG ATAACTGTAC AACTTGTCAC ATAGCACCAA CCGAAGACAG CAACGAGCTA ACTGAATGGG GCAACTGGTC AAGCGTTCCA ACCATGGAAA CTTGTACAAG TTGTCATACA GGCATCGACT TTGTCGCTGG TAAGGGCCAC TCTCAACAAG CTGACAACTC AAACTGTATC GCTTGTCATA GTGCGAGCTG GACTGAAGAG CTGCATAACG AAGGCTTTGC TCAAAAGAAA GCTTTCATCG AGCAGTATGG GATGGTAGCA AGCTTAACTG CAGTAAAAAC TGACACCGGT AGCGATACCA CATTAAGTGT GACAATTACT GATGCAGCGG GCTCTGCAAT TGATGCAACA GCTATTGTGG ACAAAATCGA ACAACTAGAA ACCATCACTA ATGTTGGTCC TAATTACCCA ATCATGGGTT ACAAGCCTAA TCCAATAAAC GGTACCGAGA AAGTTGTTAT TAACTTAACC GAGGCGGATA TTGTTGATGG TAAATTCGTA ACGGTAATTA AAGATTTACC TTACGGTGAT GCTAAAACAG ATACTGACAC CGCGTTCACT TTAATCGGTC TATCTCTATG TAATGATGGT GAGACAGCTG TTAAGTGTGA AGAAGGTGTG TCACATACTA GTGTGAAGGC TGCTATGGCA CATGGCACAT TATCTGGAGA GGCACCAAGC GTACGTCATA CTGATTCAGT TAACTTCAAA GCGTGTGAAA GCTGTCATGG CACAGAATGG GAACTTCATG AGAAGTACCA TGCAGGCTTT GTGATGACAG AACAGCTTGG CCGTGAAAAT GCTGATGGTG AAACAGTTGT TGGCGTTGAT GCTTGTGCAA CTTGTCACAC GCCAGACGGA GTTGGTTATT CTGGTAACTC ACTAGCACTT GAAATGAGAC TTCATAAAAC GCATAAACAA GGTGACTATG CAGTTATTGC TGGCATGAAT TGTGATCAGT GCCATAGCGA CTTCAATCGT GATGCATTCA AAAATAAAGG TGCTATAGAA ACTTCTAGCG GTGCATACAG CACACCTATC GCTGCGACTT GTGTGTCTTG TCATAGTTAC AACCTAGACA GCTTTAAAGC CCACGCAGAA GGCCAAGGCG CGATTGTTAA TAACTCTGAA ATGACAAAAC AACAAATTAG CGATGCAGCT CAGCTAGAAA CTTGTTTCTA CTGCCATAAG CCAACTGCAG ACGATCACAC TTCTGTGAAG ATGTAA
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Protein sequence | MMNTNKSKIA LLLAAGAVSM ALTGCGGDDG NDGNSGNPGG PAADYINTLN LKVTDVTYTD GVPTINVFAT NEEDLPVVGL TALEVKKVVQ LIPQGATGAG NSAEWQATYS SPRNDAEKLK PVDLKNGNYS FTIPVEGYNS ELTQRYNVIA SASTLADGET SVPRTELSQD FSGEGYEATY TKDVVATASC TSCHAEGKKI YHGYTSSETC AACHTQEMAD EKGKPHVAYN FLIHNVHNNI EEAHLPDDEK QNESAEKAYA LIQDNCTTCH IAPTEDSNEL TEWGNWSSVP TMETCTSCHT GIDFVAGKGH SQQADNSNCI ACHSASWTEE LHNEGFAQKK AFIEQYGMVA SLTAVKTDTG SDTTLSVTIT DAAGSAIDAT AIVDKIEQLE TITNVGPNYP IMGYKPNPIN GTEKVVINLT EADIVDGKFV TVIKDLPYGD AKTDTDTAFT LIGLSLCNDG ETAVKCEEGV SHTSVKAAMA HGTLSGEAPS VRHTDSVNFK ACESCHGTEW ELHEKYHAGF VMTEQLGREN ADGETVVGVD ACATCHTPDG VGYSGNSLAL EMRLHKTHKQ GDYAVIAGMN CDQCHSDFNR DAFKNKGAIE TSSGAYSTPI AATCVSCHSY NLDSFKAHAE GQGAIVNNSE MTKQQISDAA QLETCFYCHK PTADDHTSVK M
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