| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2686 |
|---|
| Symbol | |
|---|
| ID | 5663079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 3273873 |
|---|
| End bp | 3274589 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641237328 |
|---|
| Product | UDP-2,3-diacylglucosamine hydrolase |
|---|
| Protein accession | YP_001502541 |
|---|
| Protein GI | 157962507 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01854] UDP-2,3-diacylglucosamine hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000748093 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACTC TATTTGTGGG CGATTTGCAC TTAAGTGCAG ATCGCCCCGA TATTACCCAA
GCTTTCCTTG AATTTCTCGA CACTCAACTT CACGATACCG ACGCTTTATA TATTCTTGGT
GATCTTTTTG AAGTATGGGT TGGCGACGAT ATTGCTGAGC CTTTTGTCAA CCAACTAGTC
GATGCCATTA AACACGCCTC TGAAAAGCTG CCTGTTTACT TTATTCACGG TAATAGAGAC
TTTCTCATTG GAGAGGCATT TGCAAAACGC TGCGGTATGA CACTATTGCC CGAGGTCTAT
AGCCTAGACT TATATGGCGT TTCTACGGTG ATCCTACACG GCGATAGCCT ATGTACCCTC
GATAAGTCTT ATCAACGCTT TAGAGCGTTT CGCAATCAGG GCTGGGCGAA ATGGCTGTAT
GCTCATTTAC CGAAGTCTAA ACGTCTCGGT ATTGCAGCGA AGCTTCGTGC TAAAAGCCAA
AGCAGTAATC AGCAAAAAAG CTATACCATT ATGGATGTAG AGCCTGATGC AGTAATGGAC
CTGCTCGACG CAACCCAAAC TCAGCAGATG ATCCATGGTC ACACTCACCG ACCTGATATA
CATCAACTTG CTCACGGCAA ACGTCGCATC GTTGTTGGTG ACTGGTATGA GCAAGGCAGC
ATGCTAAGTG TCAGTCAAGA CGGTGTCGAG CTAATCGAGC TTCCTTTCGG CAAGTAG
|
|---|
| Protein sequence | MRTLFVGDLH LSADRPDITQ AFLEFLDTQL HDTDALYILG DLFEVWVGDD IAEPFVNQLV
DAIKHASEKL PVYFIHGNRD FLIGEAFAKR CGMTLLPEVY SLDLYGVSTV ILHGDSLCTL
DKSYQRFRAF RNQGWAKWLY AHLPKSKRLG IAAKLRAKSQ SSNQQKSYTI MDVEPDAVMD
LLDATQTQQM IHGHTHRPDI HQLAHGKRRI VVGDWYEQGS MLSVSQDGVE LIELPFGK
|
|---|
| |