Gene Spea_2672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2672 
Symbol 
ID5663065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp3255407 
End bp3256438 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content44% 
IMG OID641237311 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001502527 
Protein GI157962493 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.887279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCCGCT ATCTCCTACG CAGATTAAAC CTGTTTATAG CAACCAGTTT TGTCCTAATT 
GCTGTCTTGT TCATAACAAC GGGTTATTTT CCAACCAATA AAGCCGTTGC ATTAACCGGG 
ATCACTGCTC CAACACCAGA GCAACTACAA AATATCGAAC AGACTTATCA GCTAAATGAG 
AGTCAACTAG AACAATTTTT TGCCTATACC AAAACTCGCT TAAGTGGCGA CTTAGGCCTA 
TCGGTCACTT CGCAGCGCCC CGTTATTGAA GAGCTGACTC AGGCACTTCC CGCGTCATTT 
GAGCTTGCTA TCGTATCCGG CTTAATTGCA GTGCTACTTG GTGTACCACT TGGAGTGCTT 
GCTTCACTAA GTAAGAACAA GGTCACCCAG CACAGTATTA TGGCAATTAC TTTAACTGGT 
TACTCCATTC CTGTTTTTTG GCTTGGACTA ACACTGTCGT TATGGTTTGG GGTTAAACTT 
GGTTGGCTTC CGGTTTCTGG ACGGATCAAT CTGTTATATG AGATAGAGCC AGTGACAGGC 
TTTATGCTAA TCGATACCTT ACTCTGGGAT TCTGTCTATC GTTTTTCCGC TTTTAAGGAT 
GCACTGTTCC ATATTATCTT ACCGTCGATA ACCTTAGCGG TACTCCCGTT TACTGTGGTC 
GTCCGTATAA CTCGTGCTGC CATGCTCAAC ATCATGGAGT TACCCTATAT TAAAGCCGCT 
GAAGCCAGAG GCTTACATAC CAGCACAATT GTGCTGCGTC ATGCACTACC AAATGCATTG 
ATCCCTGTAT TAAAAAATAT GGGCCTAATG CTAGGTACCT TTGCCACTTA TTCCATGATT 
GTCGAGGTTA TCTTCTCATG GCCCGGCGTG GGCAGTTGGT TGGTATCTGG AATTTATCAG 
CGAGATTACA CCGTTATTCA AGGTGGTGTA TTGGGCGTTT CACTGACCAT TATATTCTTG 
AGTATCTTAA TTGAAGTCAT ACATAACGCT TATAATCCGC TAAGCAGGAA AGAGATCTAT 
GCCGCGAATT AG
 
Protein sequence
MGRYLLRRLN LFIATSFVLI AVLFITTGYF PTNKAVALTG ITAPTPEQLQ NIEQTYQLNE 
SQLEQFFAYT KTRLSGDLGL SVTSQRPVIE ELTQALPASF ELAIVSGLIA VLLGVPLGVL 
ASLSKNKVTQ HSIMAITLTG YSIPVFWLGL TLSLWFGVKL GWLPVSGRIN LLYEIEPVTG 
FMLIDTLLWD SVYRFSAFKD ALFHIILPSI TLAVLPFTVV VRITRAAMLN IMELPYIKAA 
EARGLHTSTI VLRHALPNAL IPVLKNMGLM LGTFATYSMI VEVIFSWPGV GSWLVSGIYQ 
RDYTVIQGGV LGVSLTIIFL SILIEVIHNA YNPLSRKEIY AAN