| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2671 |
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| Symbol | |
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| ID | 5663064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3253779 |
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| End bp | 3255407 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237310 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001502526 |
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| Protein GI | 157962492 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.699901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGC TGCTTAAGAG AATAAAGTTA ATCGCTGGGA TCTCTTTGAT TAACTTGTTA
CTCACCGCCT GTGGTCCACA GCAAGTTCCG ACAGGGTTAG TCTATTGTTC GGAAGGCAAC
CCTGAGACTT TTAATCCTCA ATTGGTGACC TCTGGCACCA CGATTGATGC CACCTCACAG
CAGTTATACG ACAGTTTAGT CGATTACGAC CCGGTATCTG GTGAAATAGT GCCTGCGCTC
GCCACTTCTT GGGAGACTTC TGCTGACGGT CTAAGCTACC GCTTTAAATT GCGCCATGGG
GTACAGTTCC ATCAAACATC GCTATTTAGC CCGACTCGCC TCTTTAACGC CGATGATGTC
TTGTTCTCTT TCAATCGCGT CATAGATACC GACAACCCTT ATCATCGAGT TTCAAAAACA
GGTTACCCCT TCTTCCAGAG TATCGGCTTT AATCAAACGA TTAATCAGAT TGAAAGAGTC
GCCGATGATG AGGTGGTATT TCATTTAAAT CAAAGCGACG CTTCGTTCCT TTCCAACCTA
GCAACGGGTT TTTCAGTCAT TCTTTCTAAA GAATATGCCG ATAACCTCTT GGCTCAGGGC
ACACCGGAAC TACTGGATAG AAAGCCCGTG GGTACCGGCC CTTTTAAGCT AGTAAAGTAT
GTGAAAAACG AACTGATCCG CTACCATCGC AATGATAACT TTTGGCGCAC ACTACCGGAA
TTTGAACAGC TAGTGTTTAA CATCACGCCA CAAAGTAGTA CCAGATTAAC TAAGTTGATC
ACCGGTGATT GTAGCGTATC GGCATTGCCG AAGGCGGGCG AGTTGCCCGT CATTAAAGAG
CATCCTAATC TTGAACTCGA CACTCAACTC GGCTTCAATG TCGCTTTTTG GGCGTTCAAT
ACCAAGAAAA AACCTTTCGA TGATGTACGG GTACGCCAAG CGTTAGCCTA CGCCGTCGAT
AAGCAGAATA TCTTACGCGC GGTATACCAA GAAACGGCCA TTAAGGCGAC AGGCATGCTG
CCGCCGCAAT CTTGGGCTTA TCACTACAAT AAAAGTACTT ATCAATATAA CCCTGAAAAA
GCACGGGCGT TATTAGATGA TGCTGGCATC GAAAATTTAA CTATCGATAT CTGGGCAATG
CCCGTCGCTC GAATTTACAA TCCTAATGCA TTAAAAACCG CCGAGTTAAT TCAGGCCGAT
TTGGCCAACA TTGGGGTGAA AGTGAATATC GTGACCTACG ATTGGAGTGT GTTTAACCAA
AAGCTCAGTC TTAACGATTA TGACTCGGTA CTGATTGGTT GGAATGCAGA CAATAGCGAC
CCCGATAATT TCTTCTCGCC TATGATGAGT TGTGATGCAC TTAAATCATC GAGTAACCGC
GCTCAGTGGT GCAATCTTGA GTTGGATCGG ATTCTAGCCA AGGCAAAAGC CACAACATCA
GAATCAGAAC GTAAAGTACT CTATCAGCAA GCTGAAGCCT TATTTACAGA GCATGTGCCG
ATGATGACAT TTGCCCATGC CACGCAACTG ACCTTTAAGA GCAAAGATAT TAAACAAACT
CAGCTTACTC CTTTTGGTGG GATCTCATTT GAACGAGCCA AGAAAATAAC ATCAGAGGAG
GAGCTATAA
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| Protein sequence | MKQLLKRIKL IAGISLINLL LTACGPQQVP TGLVYCSEGN PETFNPQLVT SGTTIDATSQ
QLYDSLVDYD PVSGEIVPAL ATSWETSADG LSYRFKLRHG VQFHQTSLFS PTRLFNADDV
LFSFNRVIDT DNPYHRVSKT GYPFFQSIGF NQTINQIERV ADDEVVFHLN QSDASFLSNL
ATGFSVILSK EYADNLLAQG TPELLDRKPV GTGPFKLVKY VKNELIRYHR NDNFWRTLPE
FEQLVFNITP QSSTRLTKLI TGDCSVSALP KAGELPVIKE HPNLELDTQL GFNVAFWAFN
TKKKPFDDVR VRQALAYAVD KQNILRAVYQ ETAIKATGML PPQSWAYHYN KSTYQYNPEK
ARALLDDAGI ENLTIDIWAM PVARIYNPNA LKTAELIQAD LANIGVKVNI VTYDWSVFNQ
KLSLNDYDSV LIGWNADNSD PDNFFSPMMS CDALKSSSNR AQWCNLELDR ILAKAKATTS
ESERKVLYQQ AEALFTEHVP MMTFAHATQL TFKSKDIKQT QLTPFGGISF ERAKKITSEE
EL
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