| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2669 |
|---|
| Symbol | |
|---|
| ID | 5663062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 3251759 |
|---|
| End bp | 3252436 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641237308 |
|---|
| Product | phage shock protein A, PspA |
|---|
| Protein accession | YP_001502524 |
|---|
| Protein GI | 157962490 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
|---|
| TIGRFAM ID | [TIGR02977] phage shock protein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATCT TTTCACGCTT TGCAGACATC ATTAACTCGA ATATCAGCGC ATTACTCGAT
AAGGCTGAAG ATCCAGAGAA AATGGTTCGT CTGATCATCC AAGAGATGGA AGATACGTTA
GTTGAAGTGC GCTCTACCTC AGCAAAAGTA TTAGCCGAGA AAAAAGAGAT CATTCGTCGT
ATAGCAAAAG TACAAGAGCA AGTACAAGAT TGGGAAAGCA AAGCCGAATT AGCTTTGTCT
AAAGACCGTG AAGATCTTGC TAAGGCCGCG TTAGTTGAAA AGCAAAAAGC CAATGACCTA
GCACAAACCC TTGCCGCCGA GTTGGTTGTA GTTGAAGAGC ACATCCTACG CCTTAAAGAC
GAAGTGAACT TACTGCAAGA GAAGCTTGCC GACGCTAAAG CGCGCCAAAA GACAATTATC
ATGCGCAAGC AGACTGCTTC ATCGCGTTTA GAGGTGAAAA AGCAGCTTGA TTCTAGCAAG
ATTGACAATG CAATGAGCAA GTTTGAGCAA TATGAGCGCC GCGTAGAAAG CCTTGAGTCG
CAGGTTGATT CTTATGACTT GGGTAATAAG AAGACGCTTA ATGATGAATT TGCAGCCCTA
GAAGCTGAAG ACTCAGTCAA TGCAGAGCTC GAAGCGCTTA AGGCGAAAAT GAAGGGAAGT
AAGACTAAAG CTAAGTAA
|
|---|
| Protein sequence | MGIFSRFADI INSNISALLD KAEDPEKMVR LIIQEMEDTL VEVRSTSAKV LAEKKEIIRR
IAKVQEQVQD WESKAELALS KDREDLAKAA LVEKQKANDL AQTLAAELVV VEEHILRLKD
EVNLLQEKLA DAKARQKTII MRKQTASSRL EVKKQLDSSK IDNAMSKFEQ YERRVESLES
QVDSYDLGNK KTLNDEFAAL EAEDSVNAEL EALKAKMKGS KTKAK
|
|---|
| |