Gene Spea_2665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2665 
Symbol 
ID5663058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3248391 
End bp3249503 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content45% 
IMG OID641237304 
Producthypothetical protein 
Protein accessionYP_001502520 
Protein GI157962486 
COG category[S] Function unknown 
COG ID[COG3768] Predicted membrane protein 
TIGRFAM ID[TIGR01620] conserved hypothetical protein, TIGR01620 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.781372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACAAG GTGATAATTC CATAAGAAAG CAGCAGCGAT TTGACAGCGA TGCCAATGAG 
CCTGAATCGA AACTTGCTCA CTCTGTTAGC TTCGAGGCGC AGGTCGATTT TATTGAGGCT
GAAGCGGAGC CTGAGCTAGA GCTTAAAGCA AATGCAGAGC TTGATTCGCT GGTCGAGCAG
CGTTTATCCA ATTTCGAATC AATAGCCCCA CAGAAACCTG GCAAAACCAA GCGTAACTGG
CTTGCCAGGA TCAGTTTAAC GGGCGTTGCT ATCGTTATCG CAGTAGAAGC ATTTCTTGGT
CTACAGGCTG CTTTTGTGCA AAGCAGTTGG TTATTTGGGC TTTACGCCAG TGTGACTGGG
GTCGTATTAC TTTGGGCCGC CAAGGTGACT TTTGTTGAAT GGCGTAAGTT AAAGGCGCTT
AAGCATATCG AAGACACACA AACTGTCGGC AAGCGTCTAG TTCACAGTAT GCAGATGGGG
GAGGCCGATC CCTTTATCGA TGAGATAGTC GCAAAATTGC CAAAGACTGC AGAACTGACA
AAGTTTCAAC AAAATAACAC GCCAGAGCAT AACGATGCCG AGAAATTGAT GTTGTTCGAC
TCTATCGTGT TAACCGAACG AGATTTAGTG GCTAAGAAAA TCGTACGCCG ATTTGCCCAG
GAGTCAGCGT TGCTATTGGC TGCTAGCCCT CTAGCAGTAT TGGACATGGC GATTATTCTT
TGGCGTAACC AGAGCATGAT CAATAAGATT GCCGATTGCT ATGGGATAGA GTTGGGTTAC
TGGAGCAGAA TAAAGCTTAT TCGTAGCATT ATTGGCAATA TTATCTATGC AGGTTCCAGT
GAGATTATTA CCGATTTAGG CACTCAGTTA TTGTCGGTAG AAATGTCTGG TAAGTTATCG
GCTAGACTTG GGCAAGGGCT AGGTGGTGGA TTACTAACGG CAAGGCTCGG CTATCAAGCG
ATGGCATTAT GTCGTCCGCT TGAGTTTAAT CAACAATCAA AGCCTAAGCT TTCAGGGATC
CATAAAGAGC TGCTACTCAG TTTAAAAGAG CTATCATCGA GTGTACTGTC TAAAACCGTT
AAGGCGGAGA AGGCCAAAGT CCATAAAGAT TAA
 
Protein sequence
MSQGDNSIRK QQRFDSDANE PESKLAHSVS FEAQVDFIEA EAEPELELKA NAELDSLVEQ 
RLSNFESIAP QKPGKTKRNW LARISLTGVA IVIAVEAFLG LQAAFVQSSW LFGLYASVTG
VVLLWAAKVT FVEWRKLKAL KHIEDTQTVG KRLVHSMQMG EADPFIDEIV AKLPKTAELT
KFQQNNTPEH NDAEKLMLFD SIVLTERDLV AKKIVRRFAQ ESALLLAASP LAVLDMAIIL
WRNQSMINKI ADCYGIELGY WSRIKLIRSI IGNIIYAGSS EIITDLGTQL LSVEMSGKLS
ARLGQGLGGG LLTARLGYQA MALCRPLEFN QQSKPKLSGI HKELLLSLKE LSSSVLSKTV
KAEKAKVHKD