Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2665 |
Symbol | |
ID | 5663058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3248391 |
End bp | 3249503 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641237304 |
Product | hypothetical protein |
Protein accession | YP_001502520 |
Protein GI | 157962486 |
COG category | [S] Function unknown |
COG ID | [COG3768] Predicted membrane protein |
TIGRFAM ID | [TIGR01620] conserved hypothetical protein, TIGR01620 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.781372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACAAG GTGATAATTC CATAAGAAAG CAGCAGCGAT TTGACAGCGA TGCCAATGAG CCTGAATCGA AACTTGCTCA CTCTGTTAGC TTCGAGGCGC AGGTCGATTT TATTGAGGCT GAAGCGGAGC CTGAGCTAGA GCTTAAAGCA AATGCAGAGC TTGATTCGCT GGTCGAGCAG CGTTTATCCA ATTTCGAATC AATAGCCCCA CAGAAACCTG GCAAAACCAA GCGTAACTGG CTTGCCAGGA TCAGTTTAAC GGGCGTTGCT ATCGTTATCG CAGTAGAAGC ATTTCTTGGT CTACAGGCTG CTTTTGTGCA AAGCAGTTGG TTATTTGGGC TTTACGCCAG TGTGACTGGG GTCGTATTAC TTTGGGCCGC CAAGGTGACT TTTGTTGAAT GGCGTAAGTT AAAGGCGCTT AAGCATATCG AAGACACACA AACTGTCGGC AAGCGTCTAG TTCACAGTAT GCAGATGGGG GAGGCCGATC CCTTTATCGA TGAGATAGTC GCAAAATTGC CAAAGACTGC AGAACTGACA AAGTTTCAAC AAAATAACAC GCCAGAGCAT AACGATGCCG AGAAATTGAT GTTGTTCGAC TCTATCGTGT TAACCGAACG AGATTTAGTG GCTAAGAAAA TCGTACGCCG ATTTGCCCAG GAGTCAGCGT TGCTATTGGC TGCTAGCCCT CTAGCAGTAT TGGACATGGC GATTATTCTT TGGCGTAACC AGAGCATGAT CAATAAGATT GCCGATTGCT ATGGGATAGA GTTGGGTTAC TGGAGCAGAA TAAAGCTTAT TCGTAGCATT ATTGGCAATA TTATCTATGC AGGTTCCAGT GAGATTATTA CCGATTTAGG CACTCAGTTA TTGTCGGTAG AAATGTCTGG TAAGTTATCG GCTAGACTTG GGCAAGGGCT AGGTGGTGGA TTACTAACGG CAAGGCTCGG CTATCAAGCG ATGGCATTAT GTCGTCCGCT TGAGTTTAAT CAACAATCAA AGCCTAAGCT TTCAGGGATC CATAAAGAGC TGCTACTCAG TTTAAAAGAG CTATCATCGA GTGTACTGTC TAAAACCGTT AAGGCGGAGA AGGCCAAAGT CCATAAAGAT TAA
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Protein sequence | MSQGDNSIRK QQRFDSDANE PESKLAHSVS FEAQVDFIEA EAEPELELKA NAELDSLVEQ RLSNFESIAP QKPGKTKRNW LARISLTGVA IVIAVEAFLG LQAAFVQSSW LFGLYASVTG VVLLWAAKVT FVEWRKLKAL KHIEDTQTVG KRLVHSMQMG EADPFIDEIV AKLPKTAELT KFQQNNTPEH NDAEKLMLFD SIVLTERDLV AKKIVRRFAQ ESALLLAASP LAVLDMAIIL WRNQSMINKI ADCYGIELGY WSRIKLIRSI IGNIIYAGSS EIITDLGTQL LSVEMSGKLS ARLGQGLGGG LLTARLGYQA MALCRPLEFN QQSKPKLSGI HKELLLSLKE LSSSVLSKTV KAEKAKVHKD
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