| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2664 |
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| Symbol | |
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| ID | 5663057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3246844 |
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| End bp | 3248025 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237303 |
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| Product | cystathionine gamma-synthase |
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| Protein accession | YP_001502519 |
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| Protein GI | 157962485 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01328] methionine gamma-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.16221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGATA GATGGCAATT AGCCACAAAA GTGATCCATG CTGGGCGTGA GGCTAATGAG
TCTGGCGCAC TCGTGACACC TTTGTGCCAG AGTGCGACCT TTGTATTTGA GACCGCAGAG
CAGGGCGGAG CAAGGTTTGC GGGTGATGAG CAAGGTTATA TCTATACCCG CTTGGGTAAC
CCGACGACGG CGGAGCTTGA GCGTAAAATT GCCGCACTCG AGGGAAGCGA TGCTGCGGCT
GCTACTGCAT CGGGAATGGC GGCGGTTTCT GCAGCCTTGC TGGCAAACTT AAGCCATGGC
GATCATTTAG TGGCATCCCA TGCTGTTTAT GGCTGCACCT TTTCCCTTAT GACCTCACAA
CTCGTTAAGT TTGGTATCGA GGTGACGCTA GTTAACTTTA GCGACGAAAC AGAGATTAAA
GCGGCAATAA AGCCCAATAC CAAAGTGATA TTTTGTGAGA CACCGGTAAA CCCTCATCTC
GATGTGTACA ACCTCGATCT GATAGCTGCC ATAGCTAAGC AACACAATTT AGTGAGTGTG
GTGGATAACA CCTTTATGAC ACCACTACTG CAACAACCGA TTAAGCATGG CATCGATATT
GTTATTCACA GTGCAACAAA GTACCTCAAT GGTCACGGTG ATGTTATCGC TGGGCTTATT
TGTGCCAGCG TTGAACAGAT GGAAGTGATT AAGTTTGAAA TACTGAAAGA TGTTGGCGCG
GTGATTTCGC CCCACGATGC CTGGTTAATT CTACGTGGAT TAAAAACCTT AGACGTCCGA
TTAACCCGAC ACTGTGATAA TGCCGAGAAA GTCGCAAGTT ACCTTGAGGG TCACCCGAAA
GTGTCCAAAG TGTACTACCC GGGTCTTGAA AGTCATCCTG GACATTCGCT TATAGGCACC
CAGATGCGTA GGGGCGGAGG CGTAATAGCC TTCGAGCTAG AAGCAAGTCT TGAACAATCC
ATCGCATTCA TTAATCGATT ATCACTGTTT TCTATCGCCG TCAGTCTTGG TGATGCGGAG
TCATTAATTC AGCACCCAGC ATCAATGACA CATTCACCAT ACAGTGAAGA TGAACGTATT
AAGGCAGGTA TTAAAGATAA CTTACTGAGG ATTTCTGTGG GCTTAGAATC GGTAGAAGAT
ATTATTCAGG CTCTGGAAGA TGGCCTAGCG AGTGTAGAGT AG
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| Protein sequence | MQDRWQLATK VIHAGREANE SGALVTPLCQ SATFVFETAE QGGARFAGDE QGYIYTRLGN
PTTAELERKI AALEGSDAAA ATASGMAAVS AALLANLSHG DHLVASHAVY GCTFSLMTSQ
LVKFGIEVTL VNFSDETEIK AAIKPNTKVI FCETPVNPHL DVYNLDLIAA IAKQHNLVSV
VDNTFMTPLL QQPIKHGIDI VIHSATKYLN GHGDVIAGLI CASVEQMEVI KFEILKDVGA
VISPHDAWLI LRGLKTLDVR LTRHCDNAEK VASYLEGHPK VSKVYYPGLE SHPGHSLIGT
QMRRGGGVIA FELEASLEQS IAFINRLSLF SIAVSLGDAE SLIQHPASMT HSPYSEDERI
KAGIKDNLLR ISVGLESVED IIQALEDGLA SVE
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