| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2662 |
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| Symbol | |
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| ID | 5664792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3244655 |
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| End bp | 3244972 |
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| Gene Length | 318 bp |
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| Protein Length | 105 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641237301 |
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| Product | helix-hairpin-helix repeat-containing competence protein ComEA |
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| Protein accession | YP_001502517 |
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| Protein GI | 157962483 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.648617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATAAAG TGTTTTTGTC TGTTTTATGC CTATCTAGTT TATTAATATT CCCCGCAGCT
GCGGAAACCC AAGTTACCGA AAAGCCCGCC TCCCAATCGC AAGCTAAGCA ATCAGTAGCT
AAGTCAGAGT TGGTTAAGAT CAATAGCGCA ACGGCTGCAG AGTTATCGTC GCTTAATGGC
ATAGGAGAGG CTAAGGCTAC GGCTATTGTT GAATATCGCA AAGCCCACGG TAATTTCAGT
TCTGTTGAAG AGCTAACTAA TGTAAAGGGG ATCGGTGAAA AGCTGGTTGA TAAAAATCGC
AGTCAGTTAA GCCTCTAA
|
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| Protein sequence | MYKVFLSVLC LSSLLIFPAA AETQVTEKPA SQSQAKQSVA KSELVKINSA TAAELSSLNG
IGEAKATAIV EYRKAHGNFS SVEELTNVKG IGEKLVDKNR SQLSL
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