Gene Spea_2657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2657 
Symbol 
ID5663050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3239427 
End bp3240200 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content45% 
IMG OID641237295 
Producthypothetical protein 
Protein accessionYP_001502512 
Protein GI157962478 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATTTAC TTCTCGACCC TAGTAGTTGG GCCATACTCG CATTAGTGGG ATTTATTGCT 
GGGTTTATCG ATGCCGTATC AGGCGGCGGT GGACTACTTT CGATTCCCGC ACTACTCACA
ATGGGCGTTC CTCCCCATCT GGCGCTAGGA ACCAATAAGC TTGCTGCGAG TTTTGGCTCA
TCGATGGCGG CTTACACTTA TTATAAACAG AGACTATTTT CTCCCTCTTT GTGGTACCAC
ACCTTTATCG CCACTTTTAT TGGCGCGGTA ATCGGTACCT TCATCGTTTA TCATATCGAT
AATCAATGGC TAGAAAAGTG GCTACCCATC ATGATCATAG CCATTGCTCT CTATACCTTG
TTTCAACCCA ATGCCATGGG CGATAGCAAC CATAAATCTC CGCAAAAGCC AAAAAACAAA
ATGAAACAGT GGTTACAGGG GTTACCACTG GGTTTTTACG ACGGCTTTGC AGGGCCCGGC
ATCGGCGCAT TCTGGACAGT ATCGAGCACC GGGTTACACA AACTGCCTTT GCTATATAGT
TGTGGACTCG CCAGAGCCAT GACCTTTACC AGTAACTTAA CCTCCTTGAT TATTTTTATC
GCGTTAGGAA AGGTGAATTT TGCCATAGGC TTATCCATGG GAGTTTGCAT GATGGCAGGC
TCTTATATAG GTGCACATTC GGCTATTAAG TTTGGCCTAC CCTTTATTCG TCCGATTTTC
ATTACCGTTA TACTATTAAT AGCAGCGCAG TTAGTTTGGA GTGCTTGGTT ATGA
 
Protein sequence
MDLLLDPSSW AILALVGFIA GFIDAVSGGG GLLSIPALLT MGVPPHLALG TNKLAASFGS 
SMAAYTYYKQ RLFSPSLWYH TFIATFIGAV IGTFIVYHID NQWLEKWLPI MIIAIALYTL
FQPNAMGDSN HKSPQKPKNK MKQWLQGLPL GFYDGFAGPG IGAFWTVSST GLHKLPLLYS
CGLARAMTFT SNLTSLIIFI ALGKVNFAIG LSMGVCMMAG SYIGAHSAIK FGLPFIRPIF
ITVILLIAAQ LVWSAWL