| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2654 |
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| Symbol | |
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| ID | 5663047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3233401 |
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| End bp | 3234612 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641237292 |
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| Product | porin |
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| Protein accession | YP_001502509 |
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| Protein GI | 157962475 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.157647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA CTCTAGTAGC ATCGGCTTTA GCCGCAGTGA TATTTGTACC AACAGCATCA
GCAATTGAAA TTTATAAAGA TGATAAAAAT GCAGTAGAAA TTGGTGGTTA TGTTGATGCT
CGCATCATCA ATACTCAAGG TGCTACAGAA GTGGTTAACG GCGCTTCACG TATTAATTTC
GGTTTTACTC GCCAGATGAG CGACGGCTGG AAAGCTTATA CTAAGCTAGA GTGGGGCGTA
AACCCATTCG GTAATACCGA CATCGTTTAC AACAGCGACA GTACATTAGA ATCTCAAAGC
GGTGACTTCT TAAATAACCG TTTAGGCTAT GTAGGTCTTG CACACGACAC ATATGGTTCA
ATCACTATTG GTAAGCAATG GGGCGCATGG TATGACGTAG TTTATAACAC TAACTATGGC
TTCGTATGGG ATGGTAACGC ATCAGGTACT TACACTTACA ATAAGGCTGA TGGTGCTGTA
AACGGTACTG GCCGTGGTGA CAAAACGGTT CAATACCGTA ATGTATTCGG TGATTTCAGC
TTCGCAGTTC AGGCTCAGCT TAAGCAAGAT AGTTTTGATA TAAACGAAAC TGCCACGGGT
GCAAGCACTT TGTTCCCATC AACAGCTAAA GTTGCTGGTG TTAATAATTC AAATGCAGTA
ACAACAGTTG AATATAACAA CACTTATGGC GGTTCTGCTA CGTACAACGT AACTGAAAAC
TTAGTGGTAA CTGCAGGTTT TAACTTTGGC GAGTTCGAAG CCACTACTTC TGCTGGTAAG
CGTCTAACTG AAACTGACTC TATCTACGGT CTAGGTGCTA GCTGGGGTAA CTGGGGCGGT
GAAGGTGTTT ACGCTGCATT CAACGTTAAC AAGCAAGAGT TCCACGATAC TGATAACCTA
AACCGTATGA TCCAAGATGC ATGGGGTCTA GAATCAATTG CTTCTTACAA GTTCGATAAC
GGTATCCGTA CTTTCGTTTC TTATAACATC CTAGAAGCAG GCGACGAATA CGAAGCAGCT
TACAATGGTG ATGTATTCAA GCGTCAGTTT GCAGTTGCTG GTGTTCACTA TGTTTGGGAC
TCAAACACTG TTCTTTATCT AGAAGGTCGT AAAGATTTTA GTGATTTCAC TAGCGCAGAT
AAAGTACAGC AAGCTGCGAT GGAAGTTTCT GAAGATGACG GTATCGCAAT TGGTATCCGT
TACACACTTT AA
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| Protein sequence | MKKTLVASAL AAVIFVPTAS AIEIYKDDKN AVEIGGYVDA RIINTQGATE VVNGASRINF
GFTRQMSDGW KAYTKLEWGV NPFGNTDIVY NSDSTLESQS GDFLNNRLGY VGLAHDTYGS
ITIGKQWGAW YDVVYNTNYG FVWDGNASGT YTYNKADGAV NGTGRGDKTV QYRNVFGDFS
FAVQAQLKQD SFDINETATG ASTLFPSTAK VAGVNNSNAV TTVEYNNTYG GSATYNVTEN
LVVTAGFNFG EFEATTSAGK RLTETDSIYG LGASWGNWGG EGVYAAFNVN KQEFHDTDNL
NRMIQDAWGL ESIASYKFDN GIRTFVSYNI LEAGDEYEAA YNGDVFKRQF AVAGVHYVWD
SNTVLYLEGR KDFSDFTSAD KVQQAAMEVS EDDGIAIGIR YTL
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