| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2648 |
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| Symbol | |
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| ID | 5663041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3225241 |
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| End bp | 3225861 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237286 |
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| Product | TonB family protein |
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| Protein accession | YP_001502503 |
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| Protein GI | 157962469 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0343675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGAGAG GAATAGTATC ACTGATAATT GGTGCTGCTG TGACTTTTGC CTTATTTGTC
TTCATGGCAT TCTTGGTAGG TGGCGGTCCA ACCCGCCACG ATTCCTCGAC AGAAACACCT
GTCATTGAAA TATCCATGAA CAAAGATGAT GCAACAGCGC AGAAAAAGCC AAGGGTTAAG
CCTAAACCGC CTACACCCCC AGAGCAGCCT CCAAAGCCGG ATACTACGCC ACCAGATAGT
TCATCTGACA TTGATACAAA TATGTCATTT AACATGGGTG GAGTTGATGC CGGTGGTGCT
AACACTGGAT TTAAACTAGG TAACATGATG ACACGAGACG GTGACGCAAC ACCTATCGTT
CGAATTGAAC CTCAGTATCC AATTAAAGCG GCACGCGATG GTAAAGAAGG TTGGGTGCAA
CTTAGCTTTA CGATTAACGA GTTAGGTGGT GTTGAAGACG TTAAAGTCAT CAAGGCTGAA
CCTAAGCGTC TATTTGATAA AGAAGCTCGA CGCGCACTGA AAAAGTGGAA GTACAAGCCT
AAGATTGTTG ACGGTAAAGC CCTTAAACAA CCTGGCATGA CAGTTCAGCT TGATTTCACT
CTAGACAAAG GAGGCAGATA A
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| Protein sequence | MLRGIVSLII GAAVTFALFV FMAFLVGGGP TRHDSSTETP VIEISMNKDD ATAQKKPRVK
PKPPTPPEQP PKPDTTPPDS SSDIDTNMSF NMGGVDAGGA NTGFKLGNMM TRDGDATPIV
RIEPQYPIKA ARDGKEGWVQ LSFTINELGG VEDVKVIKAE PKRLFDKEAR RALKKWKYKP
KIVDGKALKQ PGMTVQLDFT LDKGGR
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