| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2635 |
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| Symbol | avtA |
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| ID | 5663028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3208916 |
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| End bp | 3210166 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237273 |
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| Product | valine--pyruvate transaminase |
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| Protein accession | YP_001502490 |
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| Protein GI | 157962456 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3977] Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.668787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTTT CAAAGTTTGG TGAAAAATTT AATCGTTATT CCGGCATTAC CCAGTTAATG
GATGATCTCA ATGAAGGATT GCGCACTCCA GGCGCAATTA TGCTTGGCGG AGGCAACCCC
GCTTCTATTC CAGCCATGCA AGATTACTTT CATCAGGCGA CGGCAGATAT GCTAGCCAAT
GGCGAACTCG TCGCGGCATT AAGCAATTAT GACGGCCCTC AAGGAAAAGA CGCCTTCTTA
ACGGCTCTAG CGACTTTACT ACGTGATACT TATGGCTGGG AGATCAGCGA GAAAAACATC
AGCCTAAGTA ATGGCAGCCA GAGTGCGTTT TTCAACTTGT TTAATCTACT CGCGGGTGAA
CAAAGCGATG GCTGCATAAA GAAAATCTTA CTGCCCCTTG CCCCCGAATA CATTGGCTAC
AACGATGCGG GTCTAGATGA TGACATTTTT GTCTCTTACC GCCCCGATAT TGAGATGCTA
GATAATCGCA TGTTTAAGTA CCATGTAGAT TTCGAGCAGT TGCAAATCGA TGACTCGATT
GCCGCAATCT GTGTGTCTCG ACCAACGAAC CCCACTGGTA ACGTGCTCAC CGATGCAGAA
ATCAGTAAAC TCGACGAGTT AGCACGTGCA AAGGGCGTCC CTCTCATCAT AGACAATGCC
TACGGCACGC CATTTCCCAA TATCATTTTT GAGGAAGTGA CACCATTTTG GAACAGCAAC
ACCATCTTGT GTATGAGCCT ATCTAAACTT GGCCTACCCG GTGTGCGCTG CGGCATAGTG
ATCGCGAGCG AAGAGATCAC GGCAGCACTT TCTAACCTCA ATGCTATCAT CAGCCTAGCA
CCAGGGGGAT TTGGCCCCGC CATAGCTAAA CACATGATTG AGTCGGGCGA CCTGCTGCAT
TTAAGCGAAA ATGTTATCAA GCCTTTTTAT CAGCAAAAGT CTGAGTTTGC CGTGTCATTA
CTGCAGCAAT CTATTAGCGA TAGCCGATTC AGAATTCACA AACCCGAAGG CGCGATGTTC
CTCTGGCTTT GGTTTGATAA ATTACCTATC ACCACCATGG AGCTTTATAA CAGGCTGAAA
GCCCGTGGCG TATTAATTGT ACCGGGCGAG TATTTTTTCT TTGGATTAGA GCAAGATTGG
GAGCATGCGC ATCAGTGCTT ACGCATGAAC TATGTGCAAG ATGAAGCCAA AATGCGTGCT
GGCATCGCGA TTATCAGCGA AGAAGTCGCC AAGGCCTACA CAGAACTTTA A
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| Protein sequence | MQFSKFGEKF NRYSGITQLM DDLNEGLRTP GAIMLGGGNP ASIPAMQDYF HQATADMLAN
GELVAALSNY DGPQGKDAFL TALATLLRDT YGWEISEKNI SLSNGSQSAF FNLFNLLAGE
QSDGCIKKIL LPLAPEYIGY NDAGLDDDIF VSYRPDIEML DNRMFKYHVD FEQLQIDDSI
AAICVSRPTN PTGNVLTDAE ISKLDELARA KGVPLIIDNA YGTPFPNIIF EEVTPFWNSN
TILCMSLSKL GLPGVRCGIV IASEEITAAL SNLNAIISLA PGGFGPAIAK HMIESGDLLH
LSENVIKPFY QQKSEFAVSL LQQSISDSRF RIHKPEGAMF LWLWFDKLPI TTMELYNRLK
ARGVLIVPGE YFFFGLEQDW EHAHQCLRMN YVQDEAKMRA GIAIISEEVA KAYTEL
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