Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2634 |
Symbol | |
ID | 5663027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3207424 |
End bp | 3208569 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641237272 |
Product | nuclease SbcCD, D subunit |
Protein accession | YP_001502489 |
Protein GI | 157962455 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA TCCATACATC TGACTGGCAT ATTGGCAGAC AGCTTCATAA CCAGAGTCTG CTCGATGATC AGTGCTTTGT TCTCAATCAA ATAATCGAAC TCGCGACAGA GCATAACGTC GATGCGGTGG TTGTCGCTGG CGATATCTAT GACAGATCGG TTCCGCCAGC GAATGCGGTC GCCCTATTAG ATGACGTGGT TAACCGTCTG GTAAACGAGT TAAAAATCCC GCTTATCATG ATTGCCGGTA ATCATGACGG TCACGAACGT CTCGGTTTTG CCTCAAGACA GATGAATGAC AGCGGCCTGC ATATCGTAGG GCCGTTAACA CAGGAGGTGA GGGCTATTGA GCTTAAAGGT AAACAGGGGA GTGCCATGTT TTATGGTCTA CCTTATGCCG ATCCAGCCAC AGTGCGTCAG GTGTTTGATT GTGAGGCTAG CACTCACGAA GAGGCGATGG CAAAACTGCT TGAACAGGTT GAACTGCACG ACAGTAAAGG CTTACCAAAA GTCGTTGTCA GTCACTGTTT TCTCGATGGC GGCAGTGAGT CTGAGTCTGA GCGTCCGCTG AGTATCGGCG GCGCAGATAA GATCTCACCA AAATTGTTCA CACCTTTTAA CTATACGGCG TTAGGGCATT TGCACGGCCC GCAATATAAA GGCGCTGAGC ATGTGAGATA TTCGGGTTCG CTGCTTAAAT ACTCCTTCAG TGAACAGCAT CAGAACAAGT CAGTCACCTT GGTTGAATTA GACTGTGACG GCAAAGCAAC CTTTGAGTTA TTGCCTTTGA AAGCCGTGCG AGATGTACGC ATTATCGAAG GTGAGTTGGC TCAATTACTC GAACAGGGCA AAACGGATCT GAACCGTGAA GATTACCTGA TGGTGAGACT CAGTGATAAA ACGGCCATCT TAGATGCCAT GGGTAAACTG AGAAGTGTGT ACCCGAATGT ACTGCATCTA GAGCGGACAG GCTTGATGAG TGACAAGAGT AAGGTTGAGC TAAGCCGAGA TCATATTAAG AAGGGCGAAT TAGACATGTT TACTGACTTC TTTGCGCAAG TATCGGGCGA GCCTATGACA GAGGCGCAGC AACAAGCCAT GATCACTGCA ATCGATGAAT TACACAAAGC GGAGCGCACA TCATGA
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Protein sequence | MKFIHTSDWH IGRQLHNQSL LDDQCFVLNQ IIELATEHNV DAVVVAGDIY DRSVPPANAV ALLDDVVNRL VNELKIPLIM IAGNHDGHER LGFASRQMND SGLHIVGPLT QEVRAIELKG KQGSAMFYGL PYADPATVRQ VFDCEASTHE EAMAKLLEQV ELHDSKGLPK VVVSHCFLDG GSESESERPL SIGGADKISP KLFTPFNYTA LGHLHGPQYK GAEHVRYSGS LLKYSFSEQH QNKSVTLVEL DCDGKATFEL LPLKAVRDVR IIEGELAQLL EQGKTDLNRE DYLMVRLSDK TAILDAMGKL RSVYPNVLHL ERTGLMSDKS KVELSRDHIK KGELDMFTDF FAQVSGEPMT EAQQQAMITA IDELHKAERT S
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