Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2632 |
Symbol | |
ID | 5663025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3202856 |
End bp | 3204112 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641237270 |
Product | peptidase M23B |
Protein accession | YP_001502487 |
Protein GI | 157962453 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.252347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTAAAA ATCGCTTCGC GGGGATCCCT TCTTTCCATC GCAAAGTTCT TTTAGGTTCA GTATTGATCA TTGGCGCGGC CGTATTGATG CCAAGCCGTC ATGAACTATT ACCGCAGCGG ATCCCAGTTC AACTTGATAT CGATTCTATT CTTTCTCAAA CCGTGTCCGT TCCCAGTACA GAATTGCTAG AGCCAAAGCC CGCATTTCAA AAAGAGATCG TCAAAGGCGA TACTTTAAGT GGCTTATTCG AGCAAGGCGG CGTCGATCAG CAGACCATGT ACCGCGTACT CGAAGCTGAC TTAAATGTGT TGGCATTAGA TACACTAAGA CCGGGCAACA AGATCCAGTT CTGGCTTAAT GATGCAGGTG AACTGCAAAA GCTAACGCTC TACTTTAACG CCGCAAGGCA GGTGATTTTT ACTCGCTTCG ATGATGGTTC ATTCAATGTT GATGAAATTA ATATTGACGG TATTTGGCGA GACCGTGCTA TCTCTGGTCA AATTCACGGC TCTTTCTATG TTTCGGCAAA GAAAATGGGC CTTAATGCCG CAGAGATCCA GCGTGTAGAA TCATTATTAA AAGAGAAGCT TAATTTCGCC CGCGATCTTC GCGCTGGCGA CAAGTTTTCG GTTTTGATGA ACGATCAGTT TATCGATGGT GAAGCGACGG GAAACAGTCA TGTACTCGGA GTCACTATCG ACAGAGGTTC CAGTAGTATC AATGCCTATC AACATAGCGA TGGTAATTTC TATGACGAAA AAGGCCAGAG CTTAGCGCGC GCATTTCAGC GAATTCCATT GATGAAGAAC TACCGTATTA GCTCTCGATT CAACCCGAAT CGTCATCACC CTGTGACAGG CAGAAATTCA CCTCATAACG GCACTGACTT TGCCATTCCT ATCGGCACTA AAATTGTGGC GCCAGGTGAT GGTATCGTGT CTTTGGTTAC CAATCATCGT TTTGCGGGTA AGTATGTGGT GATTGAGCAC GGTAACAAGT ACCGTACTCG TTACTTGCAT CTATCTAAGT TCCTTGTCCA TAAAGGCCAG CGAGTCTCGC GCGGCCAAGT TATTGGACTG TCGGGTAATA CAGGTCGTGT TACAGGCCCA CACCTGCATT ATGAGTTCCA TATCAATGGT CGCCCAGTAG ATTCGATGAA AGCCAAAATA CCTATGGCGA GTAAACTTTC TTCAAAAGAG ATGGCGGAGT TTAGCCAGAT TGTGAAAGTG AGAAAGATGA TGATGGGCAT TGCTTAA
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Protein sequence | MSKNRFAGIP SFHRKVLLGS VLIIGAAVLM PSRHELLPQR IPVQLDIDSI LSQTVSVPST ELLEPKPAFQ KEIVKGDTLS GLFEQGGVDQ QTMYRVLEAD LNVLALDTLR PGNKIQFWLN DAGELQKLTL YFNAARQVIF TRFDDGSFNV DEINIDGIWR DRAISGQIHG SFYVSAKKMG LNAAEIQRVE SLLKEKLNFA RDLRAGDKFS VLMNDQFIDG EATGNSHVLG VTIDRGSSSI NAYQHSDGNF YDEKGQSLAR AFQRIPLMKN YRISSRFNPN RHHPVTGRNS PHNGTDFAIP IGTKIVAPGD GIVSLVTNHR FAGKYVVIEH GNKYRTRYLH LSKFLVHKGQ RVSRGQVIGL SGNTGRVTGP HLHYEFHING RPVDSMKAKI PMASKLSSKE MAEFSQIVKV RKMMMGIA
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