| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2632 |
|---|
| Symbol | |
|---|
| ID | 5663025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 3202856 |
|---|
| End bp | 3204112 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641237270 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_001502487 |
|---|
| Protein GI | 157962453 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.252347 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCTAAAA ATCGCTTCGC GGGGATCCCT TCTTTCCATC GCAAAGTTCT TTTAGGTTCA
GTATTGATCA TTGGCGCGGC CGTATTGATG CCAAGCCGTC ATGAACTATT ACCGCAGCGG
ATCCCAGTTC AACTTGATAT CGATTCTATT CTTTCTCAAA CCGTGTCCGT TCCCAGTACA
GAATTGCTAG AGCCAAAGCC CGCATTTCAA AAAGAGATCG TCAAAGGCGA TACTTTAAGT
GGCTTATTCG AGCAAGGCGG CGTCGATCAG CAGACCATGT ACCGCGTACT CGAAGCTGAC
TTAAATGTGT TGGCATTAGA TACACTAAGA CCGGGCAACA AGATCCAGTT CTGGCTTAAT
GATGCAGGTG AACTGCAAAA GCTAACGCTC TACTTTAACG CCGCAAGGCA GGTGATTTTT
ACTCGCTTCG ATGATGGTTC ATTCAATGTT GATGAAATTA ATATTGACGG TATTTGGCGA
GACCGTGCTA TCTCTGGTCA AATTCACGGC TCTTTCTATG TTTCGGCAAA GAAAATGGGC
CTTAATGCCG CAGAGATCCA GCGTGTAGAA TCATTATTAA AAGAGAAGCT TAATTTCGCC
CGCGATCTTC GCGCTGGCGA CAAGTTTTCG GTTTTGATGA ACGATCAGTT TATCGATGGT
GAAGCGACGG GAAACAGTCA TGTACTCGGA GTCACTATCG ACAGAGGTTC CAGTAGTATC
AATGCCTATC AACATAGCGA TGGTAATTTC TATGACGAAA AAGGCCAGAG CTTAGCGCGC
GCATTTCAGC GAATTCCATT GATGAAGAAC TACCGTATTA GCTCTCGATT CAACCCGAAT
CGTCATCACC CTGTGACAGG CAGAAATTCA CCTCATAACG GCACTGACTT TGCCATTCCT
ATCGGCACTA AAATTGTGGC GCCAGGTGAT GGTATCGTGT CTTTGGTTAC CAATCATCGT
TTTGCGGGTA AGTATGTGGT GATTGAGCAC GGTAACAAGT ACCGTACTCG TTACTTGCAT
CTATCTAAGT TCCTTGTCCA TAAAGGCCAG CGAGTCTCGC GCGGCCAAGT TATTGGACTG
TCGGGTAATA CAGGTCGTGT TACAGGCCCA CACCTGCATT ATGAGTTCCA TATCAATGGT
CGCCCAGTAG ATTCGATGAA AGCCAAAATA CCTATGGCGA GTAAACTTTC TTCAAAAGAG
ATGGCGGAGT TTAGCCAGAT TGTGAAAGTG AGAAAGATGA TGATGGGCAT TGCTTAA
|
|---|
| Protein sequence | MSKNRFAGIP SFHRKVLLGS VLIIGAAVLM PSRHELLPQR IPVQLDIDSI LSQTVSVPST
ELLEPKPAFQ KEIVKGDTLS GLFEQGGVDQ QTMYRVLEAD LNVLALDTLR PGNKIQFWLN
DAGELQKLTL YFNAARQVIF TRFDDGSFNV DEINIDGIWR DRAISGQIHG SFYVSAKKMG
LNAAEIQRVE SLLKEKLNFA RDLRAGDKFS VLMNDQFIDG EATGNSHVLG VTIDRGSSSI
NAYQHSDGNF YDEKGQSLAR AFQRIPLMKN YRISSRFNPN RHHPVTGRNS PHNGTDFAIP
IGTKIVAPGD GIVSLVTNHR FAGKYVVIEH GNKYRTRYLH LSKFLVHKGQ RVSRGQVIGL
SGNTGRVTGP HLHYEFHING RPVDSMKAKI PMASKLSSKE MAEFSQIVKV RKMMMGIA
|
|---|
| |