| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2624 |
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| Symbol | |
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| ID | 5663017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3194312 |
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| End bp | 3195658 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237262 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001502479 |
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| Protein GI | 157962445 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.394652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCAATTTA CCGATTTCGC ACTGGATCAA CGTCTGTTAC AGAGCCTTAA GCACATGGGC
ATTGACACCC CAACAGAGAT CCAGGAGCAA GCCATTCCTG TTGCCCTAGC AGGCAAAGAC
CTAATGGCGT CTTCTAAAAC AGGCTCAGGT AAAACATTAG CCTTTTTATT GCCTGCGATG
CAAAGACTGA TTTCGTGTAA AGCATTGAGT AAACGCGATC CGCGCGTGGT CATTCTATTA
CCGACCCGCG AATTGGCCAC TCAAGTGTAC AGCCAGCTAC GACTTTTAGT TGCCAACACT
CAATTCAAGG CAACCAAGAT TCTAGGTGGT GAGAACTTTA ATGATCAAGC CAAAGCCCTA
TCCCGAGATC CGCACTTTGT TGTGGCAACA CCAGGCCGCT TAGCTGACCA CCTAAAACAG
CATCACCTGC ACCTTAATGG TCTTGAACTG CTGATCTTAG ATGAAGCAGA CCGCATGCTA
GATCTTGGCT TTGCCGAGCA GTTGAAAATG ATTAACGCTG CAGCGGATCA TAAGCGTCGT
CAAACACTTA TGTTCTCAGC GACTTTAGAT CACGGCGATG TAAATGACAT TGCCAATGAG
CTATTGAAGT TCCCTGAGCA CGTAGCCATT GGCGCGGGTA ATCTAGAACA TAAAGATATT
ACTCAACGTA TCTTCTTATG TGACCATTTG GATCATAAAG AAGCCATTTT GACTCGCATT
CTAAAAGAAG AGCAGCAAAA GCAGATCATC ATCTTCACTG CTACAAGACA AGATACTGAC
CGCCTAGCGA CAAAGTTAGC TGCAGAAGGT TTTAAAACCG CATCATTAAG CGGTGAGTTA
AAGCAAAATG CCCGTAACCA AATCATGGAT GAGTTTAGCC GTGGCTTGCA GCAAATTCTT
GTGACTACTG ACGTTGCCTC TCGTGGACTG GATCTATTAA ACGTATCTTT AGTAATTAAC
TTTGATATGC CAAAGTTTGC CGAAGAGTAT GTACACCGTA TTGGCCGTAC TGGCCGCGCA
GGTGCAAAAG GTGATGCTAT CTCTCTTGTG GGTCCTAAAG ACTGGATTAA CTTTACTCAA
GTACAAACGT TCTTAAATAA GACGTTCAAC TTTAGCGAGC TTGAAGGCCT AAAAGCAAAA
TTCAGTGGCG TTAAAGCCCA AGCGCAAACA CCACGCAAAG TTAAGCCTGC TGTTGCAGCT
AAAAAGAAAG CTGTTACCGC TAAGAAAAAA ACCGCAGCAA AAGCGGCAGC CAATCGTGAT
AGACGTTTTG CTACCGGCGT TGATGTTGGC GATGCGCCAA TGCTTAGAAA ACCTAAAGCT
AAGCTACAAG ACACACCTGA AGATTAA
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| Protein sequence | MQFTDFALDQ RLLQSLKHMG IDTPTEIQEQ AIPVALAGKD LMASSKTGSG KTLAFLLPAM
QRLISCKALS KRDPRVVILL PTRELATQVY SQLRLLVANT QFKATKILGG ENFNDQAKAL
SRDPHFVVAT PGRLADHLKQ HHLHLNGLEL LILDEADRML DLGFAEQLKM INAAADHKRR
QTLMFSATLD HGDVNDIANE LLKFPEHVAI GAGNLEHKDI TQRIFLCDHL DHKEAILTRI
LKEEQQKQII IFTATRQDTD RLATKLAAEG FKTASLSGEL KQNARNQIMD EFSRGLQQIL
VTTDVASRGL DLLNVSLVIN FDMPKFAEEY VHRIGRTGRA GAKGDAISLV GPKDWINFTQ
VQTFLNKTFN FSELEGLKAK FSGVKAQAQT PRKVKPAVAA KKKAVTAKKK TAAKAAANRD
RRFATGVDVG DAPMLRKPKA KLQDTPED
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