Gene Spea_2621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2621 
Symbol 
ID5663014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3191196 
End bp3191660 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content44% 
IMG OID641237259 
ProductMarR family transcriptional regulator 
Protein accessionYP_001502476 
Protein GI157962442 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.276728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCAACA ACAACTCAAA CAATACTGTC GATGCATGCC TTTCTGATAA TGTCTGTTTT 
GCGCTTTATA CAGCGGCAAA CGCACTGATG AGAGCCTATA GGCCGTTATT GGAACGCTAT
GAGCTAACGT ATCCGCAATA CTTAGTAATG CAGTCTTTAT GGTTGCAAGA CAGGGTGAGC
CTTACACAAA TATCTAAATC CACACGGCTC GATATGGGCA CCTTAACGCC CATTGTTAAA
CGGCTTGAAG CGAAAGGCTT TTTGCAGCGT CTAGCCGATG AAAGCGATGA GCGTAAAAAG
GTAATTGTAC TGACTGATGA CGGTTTTAAG CTTAAGCTAG AAGCCTTGGC ACTAAAGCAA
ACTTTGCTGG ATAAGGTCAA CATGACCGAC GAGCAAGTGG AGTCACTGAG AACTTTGTGC
CTGTCTTTAA CTTATGAGCT AACCCATGAG TTGACGCAAA AATAG
 
Protein sequence
MTNNNSNNTV DACLSDNVCF ALYTAANALM RAYRPLLERY ELTYPQYLVM QSLWLQDRVS 
LTQISKSTRL DMGTLTPIVK RLEAKGFLQR LADESDERKK VIVLTDDGFK LKLEALALKQ
TLLDKVNMTD EQVESLRTLC LSLTYELTHE LTQK