Gene Spea_2616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2616 
SymbolribA 
ID5663009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp3185955 
End bp3186584 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content43% 
IMG OID641237254 
ProductGTP cyclohydrolase II 
Protein accessionYP_001502471 
Protein GI157962437 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATTA AATACATCGC GTCTTCAAAA TTACCAACCC CTTGGGGTGT TTTCGAAATG 
CATGGTTTTG AAGATAGTGA GACGGGTAAA GAGCATGTAG CGCTTACCTT TGGCACATTT 
ACCCCAGATG CACCAATCCT TGGACGTATC CATTCAGAAT GTTTAACTGG CGATGCATTG 
TTTAGTTTGC GCTGTGATTG TGGTTTTCAA CTGCAAACCG CGATGCAGAA TATTGCCGAA 
GAAGGTCAAG GATTTATCCT CTACTTGCGC CAAGAAGGTC GTGGTATCGG TCTGCTTAAT 
AAGATCCGTG CTTATGAGCT ACAAGATCAA GGTGCTAATA CGGTAGAAGC TAACGAACGT 
TTAGGTTTTG AAGCCGATAT GCGTAAATAC GATATGATCA TCCCTATGAT GGAGAAGATT 
GGTGTCGATA AAGTGCGTTT AATGACCAAT AATCCCCGTA AGGTTAAAGC GATGCAAAGC 
TTTGGATTGG AAGTTGTCGA ACGTGTGCCA CTGCAAGTGG GCAAAAATCG CTATAACGAA 
GGTTACCTCA AGACTAAGTC GACCCAGCTT GGACACATGA TGTCTGAGCA TCACTTCACT 
GAAACCGATC CCGAAGTTGA TAAAGACTAA
 
Protein sequence
MSIKYIASSK LPTPWGVFEM HGFEDSETGK EHVALTFGTF TPDAPILGRI HSECLTGDAL 
FSLRCDCGFQ LQTAMQNIAE EGQGFILYLR QEGRGIGLLN KIRAYELQDQ GANTVEANER 
LGFEADMRKY DMIIPMMEKI GVDKVRLMTN NPRKVKAMQS FGLEVVERVP LQVGKNRYNE 
GYLKTKSTQL GHMMSEHHFT ETDPEVDKD