| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2571 |
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| Symbol | |
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| ID | 5662964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3131172 |
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| End bp | 3131870 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237209 |
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| Product | ribonuclease T |
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| Protein accession | YP_001502426 |
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| Protein GI | 157962392 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000796721 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGACA CTTTCGACCC TAATTTAATG AAAAACCGCT TTAGAGGGTA TTTCCCAGTG
GTCATTGATG TTGAAACCGC AGGTTTTAAC GCTAAAACAG ATGCGCTGCT AGAAATTGCA
GTCAGCATGC TAAAGATGGA CGATGAAGGT GTGCTTGCTC TAGATAAGAC ATTGCATTTC
AATATTGAAC CGTTTGAAGG TGCTAACCTT GAGCCAGAAG CATTAGCCTT TACGGGGATC
GACCCCACCA GCCCTCTTCG CGGCGCTGTT AGCGAAAAAG AAGCTTTCTT AGAAATTTTT
AAAGAAGTCA AAAAAGCGCA AAAAGCTGCG GGTTGTCACC GCAGTATTAT TGTTGCTCAC
AACGCGGCAT TCGATCACGG CTTTGTTACC CAAGCGATCG AACGTAATGC ACTAAAGCGT
ACTCCTTTCC ACCCCTTTGC CACATTTGAC ACCGCAGCGC TTGCGGGCTT AGCCATAGGT
CATACTGTAC TCGCAAAGGC CTGCGCGATG GCTGGGATCC CTTTCGATAA CCGTGAAGCC
CACTCAGCAC TTTATGACAC CGAGCGCACG GCTGAGCTAT TTTGCTTAAT CGTCAACCGC
TGGAAGGCCC TAGGTGGTTG GCCTTTTATT GCTGATGAAA CAGAAGAGGC TGACACCAAC
TCCTCTGAAG AAAAAGCTGA GGACTACACT AAAAATTAG
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| Protein sequence | MTDTFDPNLM KNRFRGYFPV VIDVETAGFN AKTDALLEIA VSMLKMDDEG VLALDKTLHF
NIEPFEGANL EPEALAFTGI DPTSPLRGAV SEKEAFLEIF KEVKKAQKAA GCHRSIIVAH
NAAFDHGFVT QAIERNALKR TPFHPFATFD TAALAGLAIG HTVLAKACAM AGIPFDNREA
HSALYDTERT AELFCLIVNR WKALGGWPFI ADETEEADTN SSEEKAEDYT KN
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