| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2569 |
|---|
| Symbol | |
|---|
| ID | 5662962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 3127371 |
|---|
| End bp | 3129527 |
|---|
| Gene Length | 2157 bp |
|---|
| Protein Length | 718 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641237207 |
|---|
| Product | prolyl oligopeptidase |
|---|
| Protein accession | YP_001502424 |
|---|
| Protein GI | 157962390 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1505] Serine proteases of the peptidase family S9A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000045371 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATTC ATTCGATACT AACTAAAAAT CACTTGTTAG CTATAGGCTT AGGCATAGCT
GTAGTGGGTT GCCAGTCACA ACCAGTACAA GATAATACAA CAAATACCAT TACGAAAAGT
CAAGACAGTG TTATTGAAAC GATACACGGT GTTCAGGTTG CCGACCCTTA TCGCTATTTA
GAAGTTGAAT CAGATAAAAC TAAAAAATGG GTAAGTGAAC AGCAGAAAGC GGGCCACGAA
TATCTCGCTA ATATCGAAAA TAAGCAGGCG ATTGTTGATC GTATTACTGA GCTTTGGAAT
TTTGAGAAGA TTTCTGCACC GTTTGAAAAG GGTGATAACA CATTTTATTA CCGTAATGAT
GGATTACAGG CGCAGTCAGT TCTTTATGTA ACAGCTGCAG ATGGTCAGGC TAAAATTGCG
CTAGATCCTA ATCGTTTTTC TGATGACGGC ACCGTTGCTT TATCTGGTGT ATCTGTAAGC
GATGACGGTA AAACACTGGC TTATGGTGTC TCTAAATCGG GTTCTGATTG GCAGGCATGG
CACTTTATTG ATGTCGCGAC GGGTAACAAG CTGACCGATG AGCTGGATTG GATTAAGTTT
TCAAGTGCAG TTTGGAGCAG CGATAACAAC GGTGTCTATT ATGCCCGTTA TGATGCCCCA
GAAGGTGGTA ACGCACTTGC TGACGTTAAC TTTAACCAAA AAGTCTACTT CCACAAGATT
GGTACAAGTC AAAGTGAAGA TACTTTAGTC TATGAAAGAC CTCAGAATAA AGATTGGGGT
TTTGGTATAG AGGTGTCAGA GAAGGGCGAT TACTTGTTGC TTTATATCTC TCAAGGAACC
GATAGTCGCA ACCGATTCTT TTATAAGTCG CTTATTGAAC CACAAGCTCA AGTCGTTGAG
TTGATCCCCG ATCTTGAAGC TGAATACCAG TTTATCGGCA ACGATGATTC AATATTCTAC
TTTAAAACCG ACTATAACGC GCCAAACGGT AAAGTTATTG CGGTCGATGT AAACAATAGC
GCCAAAGATA ATTGGAAAAC GATTATTCCA GAGCTAAAAG ATCCGATCAG CAGCATAAAG
ATTATTAACG ACCATTTTGT GGTGAGTTAT CTGCATGACG TTTTAGGCAA GCTAACGGTT
TACAATATGA ATGGCGATAA GCGCCAAGAC GTGACTTTAC CAGGTAAAGG TAAGATTGCA
GGCCCTTACG GCAAGCGCAG TAAAGATTAC TTCTACTATG TTTTCAACAG CTACACTCAG
CCTCAAACGA CCTACAAGTT TGATTTTAAC ACTGGTGAGT CGACCGTTTA TTCAAAACCA
GACATCTCTT TCGACCCAAG TGATTATATT TCTGAGCAGG TTTTTTATAG CAGCAAAGAT
GGCACGAAAG TGCCAATGAT GATCTCTTAT AAGAAAGGCA TTAAAAAAGA TGGCCAAAAC
CCTACGCTGC TGTATGCCTA TGGTGGTTTC GCTATTTCAC TGACACCACG CTTTAGCCCT
GCCAATATTG CTTGGATGGA TATGGGCGGC GTGTATGCGG TGCCTAATCT TCGTGGTGGA
GCCGAATATG GTGAAAGCTG GCATCAGGCG GGTATGTTCG ATAAAAAGCA GAACGTATTT
GATGATTACT ATGCTGCTGC AGAGTACTTA ATAGAGCAAG ATTATACTAA CTCTTCTAAG
TTAGGTGCCT ATGGTCGCAG TAATGGTGGC TTATTGATGG GCGCGACATT GACTCAGCGC
CCAGAGCTAT TTGCCGCGGT ACTGCCTGCT GTTGGTGTAT TGGATATGTT ACGTTTCCAA
AAGTTCACTA TTGGATGGGC TTGGACCAGT GAATATGGCA GTGCTGATAA TGCCGAACAA
TTCCCTGCAC TCTATGCTTA TTCGCCATAC CACAACCTTA AAGCTCAAGC CTACCCCGCG
ACTATGGTGA TGACAGCCGA CCACGACGAC CGTGTTGTAC CACTGCATAG CTTTAAGTTT
GGCGCCTTGA TGCAAGAGAA ACAGCAAGGT GATGCGCCGG TAATTATGCG TATTGAGTCG
AAGGCTGGCC ATGGCGCAGG TAAGCCGACC TCAATGAAGA TTGATGAGTT TGCCGATATT
TATAGTTTCC TTTGGCATAA CTTTGGACTT CAGGTGCCAG CTAAAATAGC CAAATAA
|
|---|
| Protein sequence | MRIHSILTKN HLLAIGLGIA VVGCQSQPVQ DNTTNTITKS QDSVIETIHG VQVADPYRYL
EVESDKTKKW VSEQQKAGHE YLANIENKQA IVDRITELWN FEKISAPFEK GDNTFYYRND
GLQAQSVLYV TAADGQAKIA LDPNRFSDDG TVALSGVSVS DDGKTLAYGV SKSGSDWQAW
HFIDVATGNK LTDELDWIKF SSAVWSSDNN GVYYARYDAP EGGNALADVN FNQKVYFHKI
GTSQSEDTLV YERPQNKDWG FGIEVSEKGD YLLLYISQGT DSRNRFFYKS LIEPQAQVVE
LIPDLEAEYQ FIGNDDSIFY FKTDYNAPNG KVIAVDVNNS AKDNWKTIIP ELKDPISSIK
IINDHFVVSY LHDVLGKLTV YNMNGDKRQD VTLPGKGKIA GPYGKRSKDY FYYVFNSYTQ
PQTTYKFDFN TGESTVYSKP DISFDPSDYI SEQVFYSSKD GTKVPMMISY KKGIKKDGQN
PTLLYAYGGF AISLTPRFSP ANIAWMDMGG VYAVPNLRGG AEYGESWHQA GMFDKKQNVF
DDYYAAAEYL IEQDYTNSSK LGAYGRSNGG LLMGATLTQR PELFAAVLPA VGVLDMLRFQ
KFTIGWAWTS EYGSADNAEQ FPALYAYSPY HNLKAQAYPA TMVMTADHDD RVVPLHSFKF
GALMQEKQQG DAPVIMRIES KAGHGAGKPT SMKIDEFADI YSFLWHNFGL QVPAKIAK
|
|---|
| |