Gene Spea_2566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2566 
Symbol 
ID5662959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp3125617 
End bp3126054 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content47% 
IMG OID641237204 
Productbiopolymer transport TolR 
Protein accessionYP_001502421 
Protein GI157962387 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000208666 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCAAG GCTACCAAAG GAAGCGCCGT CGTCCGGTTG CTGAAATAAA CGTGGTGCCC 
TATATCGATG TGATGTTGGT ACTGCTGATT ATTTTTATGG TGACAGCACC TATTGTGACC 
CAAGGCGTTA AGGTCGATTT ACCTCAAGGT AAAGCAGAGT CTTTACCTGC AGATAGCAAG 
CCTCCCGTTG TGGCATCAAT CGATGCCATG GGGGAGTATT ACTTAGATGT GGGCAGCTCA 
AGCAGCAAAG ACGTTTTAGA CTTAGATGAA GTTGCTGTGC GTGTGGGGGC GATTATTCTA 
TTAGAGCCAG AACGTCCAGT TGTTGTTAAA GCCGATCGCT CAATTCCCTA TGAAAAGGTG 
ATTCAATTGA TGGTGACCTT GCAAGGTGCT GGGGTACCTT CGGTGGGATT AATGACAGAT 
TCGCCGGAGG ATAAATAA
 
Protein sequence
MHQGYQRKRR RPVAEINVVP YIDVMLVLLI IFMVTAPIVT QGVKVDLPQG KAESLPADSK 
PPVVASIDAM GEYYLDVGSS SSKDVLDLDE VAVRVGAIIL LEPERPVVVK ADRSIPYEKV 
IQLMVTLQGA GVPSVGLMTD SPEDK