Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2562 |
Symbol | |
ID | 5664791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3122035 |
End bp | 3122760 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641237200 |
Product | Tol-Pal system YbgF |
Protein accession | YP_001502417 |
Protein GI | 157962383 |
COG category | [S] Function unknown |
COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000429972 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACG CCGTTTTATC AGCGGCAATT ATCCTAGTTG CAGGTTCTGC TTACGCAGCA CCTGCTCCTG TTGAGGATAT TGCTGGTGGC TCTACAGACG ATAGAGTTGC TCGTTTAGAG CGAGTTATTA AAGCTAAGCA ACAAAGCGAA TTTCAAATGC AGCAGCGTTT AGAAACATTG CAGCAAGAAG TTCTAGATTT ACGCGGACTA AGTGAACAGC AGTCATATCA AATTGAGCAG ATGTTACAAA GACAGCGCCA ATTATATGAA GACATAGCTA ACCTCTCTTC AAAGCCTGCC AATGCAGTCG TAGTTGATAC GACTAGTAGC ACACCTTCTG TATCTTCAAG CCTAGGTGAA ACTGCAAGCT ATGAGCAAGC GGTCAATTTA GTGTTGAAAG AGAAAAAGTA CGAAGCTGCT ATTCCTGCTT TTGCACAATT TATCCAGCGT TACCCAAATT CTAGCTACGC ACCTAATGCT AATTATTGGT TAGGTCAGCT ACTTTATAAT AAGAGTGAGT TTGACGGAGC CTCTAAAGCT TTTACTACTG TTGTTGAAAA ATACACCGAT TCGAGCAAGC GTGGCGAAAG CTTAGTCAAA CTGGGTATGA TTGCAGAAAA GACGGGAGAT AAAGCTAAAG CTAAAGCTTA TTATCAAAAA GTCACTCAGG AATATGCGAA CAGCGCTGCA GCCCGAATTG CGTTGCAGCA ACTTTCATCA CTTTGA
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Protein sequence | MKHAVLSAAI ILVAGSAYAA PAPVEDIAGG STDDRVARLE RVIKAKQQSE FQMQQRLETL QQEVLDLRGL SEQQSYQIEQ MLQRQRQLYE DIANLSSKPA NAVVVDTTSS TPSVSSSLGE TASYEQAVNL VLKEKKYEAA IPAFAQFIQR YPNSSYAPNA NYWLGQLLYN KSEFDGASKA FTTVVEKYTD SSKRGESLVK LGMIAEKTGD KAKAKAYYQK VTQEYANSAA ARIALQQLSS L
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