| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2561 |
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| Symbol | |
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| ID | 5662954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3118298 |
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| End bp | 3119458 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641237187 |
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| Product | porin |
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| Protein accession | YP_001502416 |
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| Protein GI | 157962382 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.23329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACATA CAAAGTTAAC AGTTTTAGCC GCAGCAACAA TTGCCGCGGT GAGTTTTAGT
GCTCAGGCTG ATACCGAGTT TAAGTTTGGT GGTTATGTGA AGGCCGATGT AATGTTTAGT
GACTATAGCA ACGGTGCACC AGATTCTGGC AGTTTATCAC GACAGTTTTA TGTACCTGGT
ACGATATACG GTGATCCAAG CAACGGTAAG CAGGTTGTCG ATTTTCACGC AAGAGAATCG
CGCTTTAACT TTAAAACTTC CACTGATCTA GATGGACATA AGCTCACTGG TTTTATTGAA
CTGGATTTTA TGACTCATAC CGACGGTAAT GAGCGCGTAT CAAATAGTTA CTCCCCACGT
ATTCGACAAG CATTTGTAAG TTTTGATAAT TGGGCCGCAG GTCAAATGTG GACCACTTTC
CAAAACCCTG GTGCATTACC TGAGAACTTA GATTTTGTTG GTGCGGCTGA AGGTACACCA
TTTGTGCGTC AAACCATGGT GCGATACACC AACGGTGGCT TCCAGTTCTC AGCTGAGAAT
CCTGAAACGA CAGTGAATGG TTATCGAGAT ATTTCGGGTA GTCGTATTAC TAGTGGTAGT
GGTATGGTGC CTGATTTTGT CGCACGCTAT AACATGAAGA CTGAGGGCGG CATGGCCTTC
ACGTTTGCAG GTATTGCGCG TCAGTTAAAT GTTGAAAAGG ATAAAGATAC TGCTAACCCT
ATCGATTCAT CAGAGTTTGG TTATGGTGTG AGCTTTACTG GTGTCATTCC AGTGGGCCAA
GATGATATTA AGATGTCTGC GACCTATGGT GAAGGGTTAG GGCGATATAT GGCGCTTAAC
TATGTTAATG CTGGTGTATT GAATGCTAGT GGTGACATTG AAACGATTGA GTCATACGGT
GGCTATATCT CATATCGCCA TTGGTGGAGC GATAAATGGA GAACGAGCAT CACTGGTTCT
GGTTTCAAGG CTGAGAACAA CATTGACTTA ATTGGCAATA ATGTGAATAA AGATTCTTAC
TCTGGCTACA TTAACTTACT TTATTCGCCT GTTAAGCCAT TGACGGTAGG CTTAGAGTAT
ATGTATGCGA AGAACACCAA AGAGAACGGT ATGGATGGTG AGTTAAATCG AGTGATATTT
TCAATGAAGT ACGTGCTTTA G
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| Protein sequence | MKHTKLTVLA AATIAAVSFS AQADTEFKFG GYVKADVMFS DYSNGAPDSG SLSRQFYVPG
TIYGDPSNGK QVVDFHARES RFNFKTSTDL DGHKLTGFIE LDFMTHTDGN ERVSNSYSPR
IRQAFVSFDN WAAGQMWTTF QNPGALPENL DFVGAAEGTP FVRQTMVRYT NGGFQFSAEN
PETTVNGYRD ISGSRITSGS GMVPDFVARY NMKTEGGMAF TFAGIARQLN VEKDKDTANP
IDSSEFGYGV SFTGVIPVGQ DDIKMSATYG EGLGRYMALN YVNAGVLNAS GDIETIESYG
GYISYRHWWS DKWRTSITGS GFKAENNIDL IGNNVNKDSY SGYINLLYSP VKPLTVGLEY
MYAKNTKENG MDGELNRVIF SMKYVL
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