Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2555 |
Symbol | |
ID | 5662948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3108354 |
End bp | 3109643 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641237181 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001502410 |
Protein GI | 157962376 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAGC CACGCTGCAA CTCGTATTAT AACGCTACGA TCAATGAGGA AACCCAATAT CCAGAGCTAG AGGGGGAGCT TAGAGTCGAT GTAGTAATAG TTGGTGGAGG CTTTACTGGG GTCGCGACGG CGTTAGAGCT CTCAGAGAAA GGCTATAAAG TTGCCTTGCT CGAGGCGAAT AAAATTGGTT GGGGCGCGAC AGGTCGCAAT GGTGGTCAGG TAACGGGAAG CCTTTCTGGC GATGAGGCGA TGACAAAACA GCTTAGAAGC CGGATCGGTA GTGATGCAGA GCAGTATGTT TGGAATATGC GCTGGCGTGG GCATGAGATC ATTAAAGAAC GAGTCAAAAA GTATGATATT GCCTGTGACT TAAAGTTTGG TCATCTGCAT ACAGCCTACA AGCCTAGCCA CTTAAAAGAG CTTGAAAAAA CCTATGCCGA AGCGTGCCTT AGAGGTATGG AAAGTGAATT GGCTATGCTG AACAAACCGG AATTAGCCGA TTATATTGAT ACGCCTTTAT ATCACGGCGG ACTACTTAAC AAACGCAATA TGCATCTACA CTCGGTTAAC CTTTGTATTG GTGAGGCGAG GGCTGCAGAA AGCCTTGGGT CATTAATTTT TGAGCATTCT GCAGTTGTAG ATATCGATGA TGGCACATTA GCAACGGTGA CGACAGCCAA AGGTAAAGTG GTGGCTAATC GGGTAGTGTT AGCTGGTAAT GCATATCATA AACTTGCTCG TAAAAAATTA CGCGGCATGT TGTTTCCTGC ATCCTTGGGT AATTGTGCGA CGGCTCAGCT ATCACCAGAA CTGGCGATGA GTTTAATTCC CAAAGATGTT GCCGTATACG ACACTCGTTT CGTGCTGGAT TATTATCGTT TAACTGCCGA TAACCGTTTG ATGTTTGGCG GTGGTACTAA TTATTCGGGT CGAGATTCCA AAGACGTTGC TGGAGAGTTA CGACCCGCGA TTGAGCGGAC CTTTCCACAA CTTAAAGGCG TGGATATTGA GTTTGGTTGG ACGGGTATGG CGGGGATAGT GCTTAATCGT ATCCCTCAGT TAGGCAAAGT GTCACCCAAT GTGTATTACT GCCAAGGTTA TTCAGGACAT GGTGTAGCGA CATCGCATAT TATGGGGGAA ATTATGGCTA ATGCTGTAGC CGGAGAGCTG CAAGAGTTTG ATTTGTTTGC ACAGATGTCC CATTACCGGA TCCCACTTAA TGAATGGTTT GGTAATCAAG CTTTAGCGCT GGGGATGATG TATTACAAGG TGATGGAAAA CTTCCGCTAA
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Protein sequence | MSEPRCNSYY NATINEETQY PELEGELRVD VVIVGGGFTG VATALELSEK GYKVALLEAN KIGWGATGRN GGQVTGSLSG DEAMTKQLRS RIGSDAEQYV WNMRWRGHEI IKERVKKYDI ACDLKFGHLH TAYKPSHLKE LEKTYAEACL RGMESELAML NKPELADYID TPLYHGGLLN KRNMHLHSVN LCIGEARAAE SLGSLIFEHS AVVDIDDGTL ATVTTAKGKV VANRVVLAGN AYHKLARKKL RGMLFPASLG NCATAQLSPE LAMSLIPKDV AVYDTRFVLD YYRLTADNRL MFGGGTNYSG RDSKDVAGEL RPAIERTFPQ LKGVDIEFGW TGMAGIVLNR IPQLGKVSPN VYYCQGYSGH GVATSHIMGE IMANAVAGEL QEFDLFAQMS HYRIPLNEWF GNQALALGMM YYKVMENFR
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