Gene Spea_2551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2551 
Symbol 
ID5662944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp3104684 
End bp3105751 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content46% 
IMG OID641237177 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_001502406 
Protein GI157962372 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0211529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATTA AAACAGACGA ACTCCGCACT TCCCTTTTAT GTAAGGTAAT TTCACCTGCA 
CAACTCGCTT CTGAATATCC TTTAACGCAA GATGCCGCTG ACTACCTAGT TCAGCAACGT 
CATGAGGTCG AAGCCATTAT TAATGGTGAA GACCAACGTT TACTTGTGAT TATTGGTCCT 
TGCTCAATCC ATGACACAGA AGCGGCTCTA GATTACGCAA AACGCTTAGC TGAACTACAC 
CAGCAATATA AAGATGATTT ATGCATCTTA ATGCGTGTCT ATTTTGAGAA GCCTCGTACA 
ACAGTCGGAT GGAAAGGACT TATCTCAGAT CCTGATCTAG ACGGTAGCTT TAGCCCTAAT 
AAAGGCCTAC GTAAAGCACG TCATCTACTG CAGCAGATCA CTGAGCTTAA GTTACCTATC 
GCGACAGAGT TTCTCGATAT GGTAAACGGC CAGTACATCG CCGATCTGAT TACTTGGGGC 
GCTATTGGTG CTCGTACGAC TGAAAGTCAG ATCCACCGTG AGATGGCTTC AGCGCTTTCT 
TGCCCTGTAG GCTTTAAAAA CGGTACCGAT GGTAATATCG ATATCGCTGT TGATGCTGTT 
CGTGCCGCGC AAGCGCCGCA CATCTTCTAC TCTCCTGACA AAGATGGTGC AATGGCGGTT 
TACCGTACTC ACGGTAACCC TTATGGCCAC ATCATCTTAC GTGGTGGCAA ACAGCCAAAC 
TACCATAGCG ACGATATCGC AAAAGCTGCG GCTCAGCTTG ATAGCGTCGG TGTGACTCAG 
AGAATGGTTG TTGATTTCAG CCATGGCAAT AGCCGTAAGA TGCATAAAGA GCAGCTTAAT 
GTCGCTGACT CAATCATGCA GCAAATGGCT AATGGCGAAA CGGCTATCGC TGGCATTATG 
GCTGAAAGCT TTATCGAAGA AGGCAATCAA AAAGTGGTTG CAGGTGAAGA GCTCATCTAC 
GGTAAGAGCA TCACCGATGC TTGCATTGAC TGGGAAGACT CAAAAGTCTT ACTAAGTGAT 
CTGGCTAAGG CTTCACGCGC AAGAATAGAA TTGCTTAAGC AAAAATAA
 
Protein sequence
MTIKTDELRT SLLCKVISPA QLASEYPLTQ DAADYLVQQR HEVEAIINGE DQRLLVIIGP 
CSIHDTEAAL DYAKRLAELH QQYKDDLCIL MRVYFEKPRT TVGWKGLISD PDLDGSFSPN 
KGLRKARHLL QQITELKLPI ATEFLDMVNG QYIADLITWG AIGARTTESQ IHREMASALS 
CPVGFKNGTD GNIDIAVDAV RAAQAPHIFY SPDKDGAMAV YRTHGNPYGH IILRGGKQPN 
YHSDDIAKAA AQLDSVGVTQ RMVVDFSHGN SRKMHKEQLN VADSIMQQMA NGETAIAGIM 
AESFIEEGNQ KVVAGEELIY GKSITDACID WEDSKVLLSD LAKASRARIE LLKQK