| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2535 |
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| Symbol | |
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| ID | 5662928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3085561 |
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| End bp | 3087783 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237161 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001502390 |
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| Protein GI | 157962356 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATA AAACATCAAC GATCATCTAT ACCGAAACTG ACGAAGCGCC GGCATTAGCG
ACACTTTCTT TGTTACCTAT TATCCAAAAG TTTACTCAAA CCGCAGGCGT TGACGTTGAA
ACTCGTGACA TCTCTTTATC TGGCCGTGTC ATTGCTAACT TCCCTGAAAA CTTAACTGCA
GAGCAACGCA TTAACGATGC ACTTGCAGAA CTGGGTGAGC TTGCTAAGAA GCCTGAAGCT
AACATTATCA AGCTGCCTAA CATCAGTGCA TCAATCCCGC AGCTTAAAGC CTGTATTCAA
GAGCTGCAGA ATAAAGGTTA CGACATTCCA AACTATCCTG ATGAGCCAGC GAACGAAGCT
GAGAAAGAGA TCCAATCTCG TTACGATAAA ATTAAAGGTA GTGCGGTAAA TCCAGTACTG
CGTGAAGGTA ACTCAGATCG CCGTGCGCCA GGTTCGGTGA AGAAGTTTGC TCAGAAAAAT
CCTCATTCAA TGGGTAAGTG GACGTCTGAT TCAAAGTCCC ACGTAGCGCA TATGAATGAA
GGCGATTTTT ACGCGAGTGA AAAATCAGTA ACCCTTGCCG ATGCCGGTAG TGTATCAATT
GTCCTGAATA AGGCGGATGG TTCAGAGCAA GTTCTACGTA GTGCGATTGC TTTGCAAGCG
GGTGAAGTTA TTGACTCGGC TGTGATGAGC AAAAAAGCAC TGGTTGAGTT TTATGAGCGT
GAAACCAATC TGGCTAAAGA ACAGAATGTT TTACTTTCAT TGCACTTAAA AGCCACCATG
ATGAAAGTGT CAGACCCTAT TTTATTCGGT CACGCAGTTA AAGTTTATTA CAAAGATGTT
TTCGCTAAAC ATGGCCAGCT ATTTGAAGAG CTAGGTGTTG ATGTAAACAA CGGTGTGGGT
GATGTCTACG CTAAGATCGC GACATTACCA AGCGATCAAA AAGCCGTAAT CGAGGCTGAT
TTAGCAGCGG TTTATAGCGA GCGCGCCGAG CTTGCAATGG TTGATTCAGA TCGTGGCATT
ACCAATTTAC ACGTACCAAG TGACGTGATC ATTGATGCAT CAATGCCTGC AGCTATTCGT
ACATCTGGTC AGATGTGGGG CCCTGATGGT CAATTAAAAG ATATGAAGGC GATGATTCCA
GATCGTTGTT ATGCGGGTGT TTATCAAGAA ACTATCGATT TCTGTATCAA CAATGGTGCA
TTTGATCCAA GTACCATGGG CAGCGTACCA AACGTGGGCC TAATGGCTCA GAAAGCTGAA
GAATACGGTA GCCACGATAA GACGTTTGAA ATCGCTGCTG CGGGCACGGT TAATGTCGTT
GACCAAGCTG GCAAGGTGCT TATGTCGCAC AATGTGGAAG CGGGAGATAT CTTCAGAATG
TGTCAGGTGA AAGATGCGCC TATCCGTGAC TGGGTTAAAC TTGCGGTAAA TCGTTCACGT
CTTTCAGCTA CACCAGCGGT ATTCTGGTTA GATTCGGCTC GTGCACATGA CACTGAAATC
ATTAGCAAAG TAGAGCTTTA CCTAAAAGAT CACGATACAA ACGGTCTTGA ACTTCACATA
ATGTCGCCAG TTGATGCAAC ACGTTTTACT CTGGACCGCG TGAAAGCGGG TAAAGATACT
ATCTCGGTAA CCGGTAACGT TTTACGTGAC TATCTAACGG ATCTTTTCCC AATTCTTGAA
CTTGGCACCA GTGCTAAAAT GTTGTCGATT GTACCGCTAA TGAATGGCGG TGGCTTGTTT
GAAACAGGCG CGGGTGGTAG TGCACCTAAG CATGTTCAGC AAGTAGAGAA AGAGGGACAT
TTACGTTGGG ATTCCCTAGG TGAATTCCTT GCTCTAGGCG CATCTTTAGA GCATTTAAGC
CAGACCACAG GTAACGCCAA GGCTCAGGTA CTTGCCGATA CGCTCGATAT TGCTATCGGC
CAGTTCCTCG ATAGCAATAA GTCGCCTTCG CGTCGTGTAG GTGAGCTTGA TAACCGTGGC
AGCCACTTCT ACCTTGCAAT GTATTGGGCA CAAGCGCTTG TTGCACAAAC CAAAGATGCT
GCGTTACAAG CAGAGTTCAG CGCATTAGCA GAGTCATTAA CTAGCAACGA AGCGAAGATT
ATTGGCGAGC TGAATGGCGT GCAAGGCCCT GTTGTTGATT TAGGTGGTTA TTACCGTTTA
GATGCAGCTA AAGCCTCTAG CGCAATGCGT CCAAGCACAA CATTAAATAG TATTGTAGGC
TAA
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| Protein sequence | MNDKTSTIIY TETDEAPALA TLSLLPIIQK FTQTAGVDVE TRDISLSGRV IANFPENLTA
EQRINDALAE LGELAKKPEA NIIKLPNISA SIPQLKACIQ ELQNKGYDIP NYPDEPANEA
EKEIQSRYDK IKGSAVNPVL REGNSDRRAP GSVKKFAQKN PHSMGKWTSD SKSHVAHMNE
GDFYASEKSV TLADAGSVSI VLNKADGSEQ VLRSAIALQA GEVIDSAVMS KKALVEFYER
ETNLAKEQNV LLSLHLKATM MKVSDPILFG HAVKVYYKDV FAKHGQLFEE LGVDVNNGVG
DVYAKIATLP SDQKAVIEAD LAAVYSERAE LAMVDSDRGI TNLHVPSDVI IDASMPAAIR
TSGQMWGPDG QLKDMKAMIP DRCYAGVYQE TIDFCINNGA FDPSTMGSVP NVGLMAQKAE
EYGSHDKTFE IAAAGTVNVV DQAGKVLMSH NVEAGDIFRM CQVKDAPIRD WVKLAVNRSR
LSATPAVFWL DSARAHDTEI ISKVELYLKD HDTNGLELHI MSPVDATRFT LDRVKAGKDT
ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQVEKEGH
LRWDSLGEFL ALGASLEHLS QTTGNAKAQV LADTLDIAIG QFLDSNKSPS RRVGELDNRG
SHFYLAMYWA QALVAQTKDA ALQAEFSALA ESLTSNEAKI IGELNGVQGP VVDLGGYYRL
DAAKASSAMR PSTTLNSIVG
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